Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_E07
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0210 + 16455879-16456068,16457494-16457648                       31   1.0  
09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503     30   1.4  
09_02_0520 - 10160551-10160939,10160986-10161220                       29   2.4  
07_03_0460 + 18425464-18427473                                         28   5.5  
03_05_0609 - 26093605-26093730,26094240-26094329,26094687-260948...    28   5.5  
01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592     28   7.3  

>02_03_0210 + 16455879-16456068,16457494-16457648
          Length = 114

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = -1

Query: 591 KRLPCTLTPDVRSGSKPGQSRGVPAVNTTTRHAAPGG*QHCSNQPRE 451
           +R PC  TP  RSG+  G  RG P       H      +H S+ PRE
Sbjct: 43  RRPPCRPTPACRSGTPAGGRRG-PCAKGQLAHENEQISEHISDIPRE 88


>09_02_0512 + 10101274-10102248,10102363-10102748,10103807-10104503
          Length = 685

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 449 ASLGWLEQCCQPPGAACLVVVLTAGTPLL*PGFDPERTSGVRVQ 580
           ++L W+     PPGAA +     +  P++ PG  P RT  +  Q
Sbjct: 263 STLTWMNSSVMPPGAAPVPPETISSEPIMSPGAAPVRTETLSSQ 306


>09_02_0520 - 10160551-10160939,10160986-10161220
          Length = 207

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = +2

Query: 449 ASLGWLEQCCQPPGAACLVVVLTAGTPLL*PG--FDPERTSGVRVQGS 586
           ++L W++    PPGAA +     +  P++ PG    PE+ S  R Q S
Sbjct: 33  STLTWMDFSVMPPGAAPVPPETVSSEPIMSPGAAVPPEKVSSPRSQVS 80


>07_03_0460 + 18425464-18427473
          Length = 669

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = -2

Query: 635 WKQTAGPWNFRAHPXNDSPALLHPTSVRGQ 546
           WK+ + P + ++ P  D P LLH  ++RG+
Sbjct: 583 WKKVSLPHDLKSEP--DKPVLLHQEAIRGR 610


>03_05_0609 -
           26093605-26093730,26094240-26094329,26094687-26094806,
           26094941-26095038,26095207-26095248,26095994-26096173,
           26096361-26096517,26097162-26097249,26097592-26097746,
           26100131-26100412
          Length = 445

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 80  DLRISVYL-NDKPAQGWTEVPTGCLTIETHEPAE 178
           + +  VY+ +D PA GW ++  G L I   E AE
Sbjct: 326 EAKCKVYVKHDDPANGWKDIGVGQLNIRCKEGAE 359


>01_05_0300 + 20624757-20625918,20626100-20627118,20627212-20627592
          Length = 853

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = -1

Query: 522 PAVNTTTRHAAPGG*QHCSNQPREANQSINPIEKHLSSYLRLH-VLAN*CTRYSNAR 355
           P+ NT    AA GG       PR     ++ + KH+  Y  L   + + CTR   ++
Sbjct: 675 PSTNTAAATAAGGGGGGRQQYPRSYQMMVSFLSKHVKRYQSLEDKIDDLCTRMEESK 731


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,223,866
Number of Sequences: 37544
Number of extensions: 308573
Number of successful extensions: 650
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)