Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_E07
         (645 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY560597-1|AAS72995.1|  838|Homo sapiens ADAM15 isoform 5 protein.     28   3.4  
AF314227-5|AAS48593.1|  838|Homo sapiens ADAM15 isoform 5 protein.     28   3.4  
AY258142-1|AAP45947.1|  737|Homo sapiens small-conductance calci...    30   8.1  
AY049734-1|AAL10706.1|  737|Homo sapiens small-conductance calci...    30   8.1  
AL954342-3|CAH72739.1|  731|Homo sapiens potassium intermediate/...    30   8.1  
AL606500-5|CAH71911.1|  731|Homo sapiens potassium intermediate/...    30   8.1  
AL390204-3|CAH71151.1|  731|Homo sapiens potassium intermediate/...    30   8.1  
AJ251016-1|CAB61331.1|  736|Homo sapiens SK3 protein protein.          30   8.1  
AF336797-1|AAK15345.1|  736|Homo sapiens small-conductance calci...    30   8.1  
AF031815-1|AAC26099.1|  731|Homo sapiens calcium-activated potas...    30   8.1  

>AY560597-1|AAS72995.1|  838|Homo sapiens ADAM15 isoform 5 protein.
          Length = 838

 Score = 28.3 bits (60), Expect(2) = 3.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 600 PPXKRLPCTLTPDVRSGSKPGQSRGVPAVNTTTRHAAP 487
           PP K LP        SG  PG   G+P +   +R A P
Sbjct: 792 PPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPP 829



 Score = 21.4 bits (43), Expect(2) = 3.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 645 CKVLEADRGPMEF*GPPXKRL 583
           C+   A  GP E  GPP + L
Sbjct: 733 CQYRAAQSGPSERPGPPQRAL 753


>AF314227-5|AAS48593.1|  838|Homo sapiens ADAM15 isoform 5 protein.
          Length = 838

 Score = 28.3 bits (60), Expect(2) = 3.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = -1

Query: 600 PPXKRLPCTLTPDVRSGSKPGQSRGVPAVNTTTRHAAP 487
           PP K LP        SG  PG   G+P +   +R A P
Sbjct: 792 PPRKPLPADPQGRCPSGDLPGPGAGIPPLVVPSRPAPP 829



 Score = 21.4 bits (43), Expect(2) = 3.4
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -1

Query: 645 CKVLEADRGPMEF*GPPXKRL 583
           C+   A  GP E  GPP + L
Sbjct: 733 CQYRAAQSGPSERPGPPQRAL 753


>AY258142-1|AAP45947.1|  737|Homo sapiens small-conductance
           calcium-activated potassium channel SK3 protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 109 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 150


>AY049734-1|AAL10706.1|  737|Homo sapiens small-conductance
           calcium-activated potassium channel SK3 protein.
          Length = 737

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 109 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 150


>AL954342-3|CAH72739.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 144


>AL606500-5|CAH71911.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 144


>AL390204-3|CAH71151.1|  731|Homo sapiens potassium
           intermediate/small conductance calcium-activated
           channel, subfamily N protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 144


>AJ251016-1|CAB61331.1|  736|Homo sapiens SK3 protein protein.
          Length = 736

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 108 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 149


>AF336797-1|AAK15345.1|  736|Homo sapiens small-conductance
           calcium-activated potassium channel protein.
          Length = 736

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 108 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 149


>AF031815-1|AAC26099.1|  731|Homo sapiens calcium-activated
           potassium channel protein.
          Length = 731

 Score = 29.9 bits (64), Expect = 8.1
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = -2

Query: 623 AGPWNFRAHPXNDSPALLHPTSVRGQ----NPVRVGGFPRST 510
           + P  FRA P ++S A+LHP+S +G     N   +G  P ST
Sbjct: 103 SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSST 144


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,142,293
Number of Sequences: 237096
Number of extensions: 1937577
Number of successful extensions: 3398
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3398
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)