Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_E07
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p pro...    29   7.1  
AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-P...    29   7.1  
AJ635224-1|CAG25619.1|  951|Drosophila melanogaster gag protein ...    28   9.4  

>AY061244-1|AAL28792.1|  664|Drosophila melanogaster LD18373p
           protein.
          Length = 664

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 626 TAGPWNFRAHPXNDSPALLHPTSVRGQNPVRVGGFPRSTLQ-PDT 495
           TA P     HP   +P    PT++ G     +GG  +S ++ PDT
Sbjct: 604 TAAPLAHPNHPNQPAPPAAAPTNLAGHMLPPLGGIAKSLIEIPDT 648


>AE014298-1641|AAF48061.1|  664|Drosophila melanogaster CG11696-PA
           protein.
          Length = 664

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 626 TAGPWNFRAHPXNDSPALLHPTSVRGQNPVRVGGFPRSTLQ-PDT 495
           TA P     HP   +P    PT++ G     +GG  +S ++ PDT
Sbjct: 604 TAAPLAHPNHPNQPAPPAAAPTNLAGHMLPPLGGIAKSLIEIPDT 648


>AJ635224-1|CAG25619.1|  951|Drosophila melanogaster gag protein
           protein.
          Length = 951

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 603 GPPXKRLPCTLTPDVRSGSKPGQSRGVPAVNT 508
           GPP + LPC+     RS + P     +P  NT
Sbjct: 452 GPPRQPLPCSTNASARSAAAPPGIAPLPPQNT 483


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,503,361
Number of Sequences: 53049
Number of extensions: 542033
Number of successful extensions: 1430
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)