Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_E04
         (657 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB...    42   7e-04
AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p pro...    38   0.016
AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA...    38   0.016
AY084168-1|AAL89906.1|  136|Drosophila melanogaster RE40776p pro...    36   0.064
AE014297-793|AAF54273.1|  136|Drosophila melanogaster CG8116-PA ...    36   0.064

>AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB,
           isoform B protein.
          Length = 149

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 22/59 (37%), Positives = 29/59 (49%)
 Frame = -3

Query: 640 LSVLXTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXFTVCKNQQFD 464
           LSV  T P  VGV Y L+ QTY LRLEY  C + +              F++C+   +D
Sbjct: 91  LSVFMTAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 149


>AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p
           protein.
          Length = 55

 Score = 37.5 bits (83), Expect = 0.016
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -3

Query: 625 TIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXFTVCKNQQFD 464
           T P  VGV Y L+ QTY LRLEY  C + +              F++C+   +D
Sbjct: 2   TAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 55


>AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA,
           isoform A protein.
          Length = 55

 Score = 37.5 bits (83), Expect = 0.016
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = -3

Query: 625 TIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXFTVCKNQQFD 464
           T P  VGV Y L+ QTY LRLEY  C + +              F++C+   +D
Sbjct: 2   TAPCFVGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYD 55


>AY084168-1|AAL89906.1|  136|Drosophila melanogaster RE40776p
           protein.
          Length = 136

 Score = 35.5 bits (78), Expect = 0.064
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -3

Query: 637 SVLXTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXFTVCK 479
           SV+ T+PS   V Y   +QT++L+LE I  A+M+               T+C+
Sbjct: 79  SVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELVYASIFICTMCR 131


>AE014297-793|AAF54273.1|  136|Drosophila melanogaster CG8116-PA
           protein.
          Length = 136

 Score = 35.5 bits (78), Expect = 0.064
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -3

Query: 637 SVLXTIPSAVGVCYFLIYQTYILRLEYIWCAVMLMXXXXXXXXXXXXXFTVCK 479
           SV+ T+PS   V Y   +QT++L+LE I  A+M+               T+C+
Sbjct: 79  SVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELVYASIFICTMCR 131


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,474,825
Number of Sequences: 53049
Number of extensions: 399035
Number of successful extensions: 1051
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)