Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_E01
(687 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 34 0.022
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 33 0.051
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.051
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 32 0.089
SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces p... 31 0.21
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 29 0.63
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 29 0.83
SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces pomb... 29 0.83
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.1
SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomy... 28 1.1
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 28 1.5
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 28 1.5
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 1.9
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 1.9
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.9
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 27 3.4
SPBC947.12 |kms2||spindle pole body protein Kms2|Schizosaccharom... 26 5.9
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 26 5.9
SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F... 26 5.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 25 7.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 7.8
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 33.9 bits (74), Expect = 0.022
Identities = 18/73 (24%), Positives = 37/73 (50%)
Frame = -3
Query: 343 LEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKE 164
LE+E + + LKSLE ++ + EE ++ LT +LK + + Q+E
Sbjct: 897 LEQESAQLNSGLKSLEAEKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEE 956
Query: 163 VDRLEDELVAEKE 125
+ L++E +++ +
Sbjct: 957 ISNLKEENMSQSQ 969
Score = 27.1 bits (57), Expect = 2.5
Identities = 29/148 (19%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = -3
Query: 598 TATAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVAR 419
T ++L++A E+ K L+ + + + + +K+ EEA
Sbjct: 382 TIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHATG 441
Query: 418 KLAMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKA--NQREEEYKNQI 245
KLA + ++ ++E++LR N+ S E+ E+ A +++++E N
Sbjct: 442 KLAEINSE----RDFQNKKIKDFEKIEQDLRACLNS-SSNELKEKSALIDKKDQELNN-- 494
Query: 244 KTLTTRLKXXXXXXXXXXRSVQKLQKEV 161
L ++K S+Q LQ+++
Sbjct: 495 --LREQIKEQKKVSESTQSSLQSLQRDI 520
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 32.7 bits (71), Expect = 0.051
Identities = 27/136 (19%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Frame = -3
Query: 517 LADEERMDALENQLKEARFLAEEADKKYDE-VARKLAMVEADLXXXXXXXXXXXSKIVEL 341
L ++ L+ Q + ++F + K+ DE + +L + ++ ++ E+
Sbjct: 367 LLKNQKQSLLDKQSRTSQFTTK---KERDEWIRNQLLQINRNINSTKENSDYLKTEYDEM 423
Query: 340 EEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEV 161
E EL+ + K +E+S E R + I ++ R + R KL+ +
Sbjct: 424 ENELKAKLSRKKEIEISLESQGDRMSQLLANITSINERKENLTDKRKSLWREEAKLKSSI 483
Query: 160 DRLEDELVAEKEKXQG 113
+ ++D+L + EK G
Sbjct: 484 ENVKDDL-SRSEKALG 498
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.051
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = -3
Query: 586 KLSEASQAADESERARKVLENRSLADEE-RMDALENQLKEARFLAEEADKKYDEVARKLA 410
KL + + A S+ ++E S R++ L N+L+ + ++ +KK++E L
Sbjct: 642 KLLDMAPATPNSKLNTNLIEQTSYQRSLIRLEQLTNELESLKSISRNKEKKFEEAISSLQ 701
Query: 409 MVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTT 230
+ ++++ S +E +L KSL +SE ++ +E YK+ + L +
Sbjct: 702 LEKSNIQLQLTSLTSERSLALEKLNDLE------KSLVLSERSKDELDESYKSLQEQLAS 755
Query: 229 R 227
+
Sbjct: 756 K 756
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 31.9 bits (69), Expect = 0.089
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 7/129 (5%)
Frame = -3
Query: 508 EERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXS-------KI 350
E+ + +++L E + E+++ Y+ V + +E +L S +I
Sbjct: 796 EKEFNQYKHKLDEFTPILEKSENDYNGVKLECEQLEGELQNHQQSLVQGESTTSLIKTEI 855
Query: 349 VELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQ 170
ELE L +N K L E + + +I +L+T +K ++QKL
Sbjct: 856 AELELSLVNEEHNRKKLTELIEIESAKFSGLNKEIDSLSTSMKTFESEINNGELTIQKLN 915
Query: 169 KEVDRLEDE 143
E DRLE E
Sbjct: 916 HEFDRLERE 924
>SPBC11C11.08 |srp1||SR family protein Srp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 275
Score = 30.7 bits (66), Expect = 0.21
Identities = 22/59 (37%), Positives = 27/59 (45%)
Frame = +1
Query: 454 QRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGP 630
+RG + R R +P P SR+PY R RR PR +R RSR SR P
Sbjct: 101 ERGGRVHGDSGRLRSRSPSPHEARSRSPYNDERSDRRSMSPR--YRSRSRSPDGRSRSP 157
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 29.1 bits (62), Expect = 0.63
Identities = 34/158 (21%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Frame = -3
Query: 592 TAKLSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKL 413
T L E A E + + +R ER+ +LENQ+ AD+KY+ + +
Sbjct: 873 TNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQV-------TIADEKYEFLYAEK 925
Query: 412 AMVEADLXXXXXXXXXXXSKIVELEEELRVVGNNLKSLEVSEEKANQREEEYKN---QIK 242
+E DL LE++L + K + K + E++Y N +
Sbjct: 926 QSIEEDLANKQTEISYLSDLSSTLEKKLSSI---KKDEQTISSKYKELEKDYLNIMADYQ 982
Query: 241 TLTTRLKXXXXXXXXXXRSVQKLQKEVDRLEDELVAEK 128
+ L ++++L +++ RL+DEL+ ++
Sbjct: 983 HSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQ 1020
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 28.7 bits (61), Expect = 0.83
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Frame = -3
Query: 490 LENQLKEARFLAEEADKKYDEVARKLAMVEADLXXXXXXXXXXXSKIVELEEELRVVG-- 317
LEN ++ R L+E +K+ DE+ L +E L +I + +++ +
Sbjct: 124 LENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARISQDVYTMSTI 183
Query: 316 ---NNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVDRLE 149
+L+ ++ S+E+A Q + ++ L T K S+ L+ +D E
Sbjct: 184 TLPQSLEQIKKSQEEALQNLSREISSLRCLQTDSKKDDTFATTSNSSIPVLENPLDTSE 242
>SPCC16C4.09 |sts5|orb4|RNB-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1066
Score = 28.7 bits (61), Expect = 0.83
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 204 PSSPSVPCRNCKRRSIGLKTNLSPKR 127
P+SP+VP + S+ TN+SP+R
Sbjct: 138 PNSPTVPSKFSLNPSVATSTNISPRR 163
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.1
Identities = 17/67 (25%), Positives = 24/67 (35%)
Frame = +1
Query: 472 PSADSRGRPCAPHPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYV 651
P DS P + +AP + P P RD P T R P G +
Sbjct: 479 PPKDSSSTSTQPTEQSNAQQAPSPKEEERPLPSEPSQNQPAEYRDTPDTPRNIMPLPGLM 538
Query: 652 GSGQPLR 672
+ QP++
Sbjct: 539 SADQPIK 545
>SPAC1142.01 ||SPAC17G6.18|DUF654 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 667
Score = 28.3 bits (60), Expect = 1.1
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +1
Query: 172 AVSAR--NARRTRHVLQPPSDGW 234
+V+AR N RR RHVL P +GW
Sbjct: 211 SVNARHDNLRRKRHVLVQPQEGW 233
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = -3
Query: 355 KIVELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTL 236
+I +L EE + + ++ LE E+AN E+Y+ Q + L
Sbjct: 147 QITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEAL 186
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = -3
Query: 550 ERARKVLENRSLADEERMDALENQLKEARFLAEE----ADK--KYDEVARKLAMVE 401
E +RK +E + LEN++KEAR + EE A+K YDE+ R+L++++
Sbjct: 303 EASRKEMETHCAT----IQTLENEVKEARKVKEESLTLANKFSDYDEIKRELSVLK 354
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +1
Query: 280 PSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPP 453
PSP+ LP S Y + PP + P+ A P+ Q +IS PP
Sbjct: 402 PSPMELPSPSTVYHQVFYPPTSTSVSSYGLGKTPQPAYGSSSPYVNGHQTQQISSLPP 459
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/75 (24%), Positives = 38/75 (50%)
Frame = -3
Query: 346 ELEEELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQK 167
E +L V+ N+KS + ++ +E+K +++ L +L ++ ++
Sbjct: 483 EQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQL-------VNSSTELESVKS 535
Query: 166 EVDRLEDELVAEKEK 122
E ++L++ELV E EK
Sbjct: 536 ENEKLKNELVLEIEK 550
>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 268
Score = 27.5 bits (58), Expect = 1.9
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = -3
Query: 571 SQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYD 431
S +++ +R++L S + E D L + L+ RF+ ++A K Y+
Sbjct: 84 SLGSNQYSISRQLLRQPSFSSSENTDRLADLLRVRRFIYQKAWKSYE 130
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = -3
Query: 337 EELRVVGNNLKSLEVSEEKANQREEEYKNQIKTLTTRLKXXXXXXXXXXRSVQKLQKEVD 158
+ELR + NL+ + +++ + E + +L RLK ++ Q+ +
Sbjct: 713 KELRSINQNLQDIISRQDQRASKFAEELLHVNSLAERLKGELNASKGEKDLRKRTQERLI 772
Query: 157 RLEDELVAEKEK 122
D+L+AE+E+
Sbjct: 773 SENDKLLAERER 784
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +1
Query: 544 RARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLR 672
RAR H RP R + R + + A G PP+ + SG R
Sbjct: 81 RARQHERPFRSRKSRRRKGKKAFSPRPGSPPSPSFYRSGSQKR 123
>SPBC947.12 |kms2||spindle pole body protein
Kms2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/92 (22%), Positives = 38/92 (41%)
Frame = -3
Query: 577 EASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 398
+A++ + E+ ++ L R+ E +D+ E K A+ +KK+ E R A
Sbjct: 180 QAAELRSKDEQVKE-LNARNAKLLEELDSSEEACKSCYTQAKTWEKKFREALRDSKEYAA 238
Query: 397 DLXXXXXXXXXXXSKIVELEEELRVVGNNLKS 302
L + IV +EE + V K+
Sbjct: 239 QLQTIHEEYEQQQAHIVRMEELIHAVEKERKT 270
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 131 FGDKFVFKP--IDLLLQFLHGTLGELGTCFSLL 223
+G +FVF+ ID L + LH L +G C LL
Sbjct: 526 WGVRFVFQEDGIDFLKRLLHELLSRMGKCQVLL 558
>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 394 SQPQPWPAYEQPHRISCRPPQRGTWLPSADS 486
S P P P QP ++S P LPSA S
Sbjct: 381 STPLPEPTPGQPRKVSGHNPPSARRLPSASS 411
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.4 bits (53), Expect = 7.8
Identities = 31/140 (22%), Positives = 47/140 (33%), Gaps = 5/140 (3%)
Frame = +1
Query: 262 PLRVGWPSPLRLPEISGCYQRHGAPPQAQRFWIRRTRHAPRRAPSQPQ---PWPAYEQPH 432
P+R P+ + P+I H PP Q + +A PS P+ + +
Sbjct: 1356 PVRPAVPTSPK-PQIPDSSNVHAPPPPVQPMNAMPSHNAVNARPSAPERRDSFGSVSSGS 1414
Query: 433 RISCRPPQRGTWLPSADSRGRPCAP--HPPTTCSRAPYVRARIHRRPGWPRTAWRWRSRD 606
+S + T A P AP H P AP P P+ +
Sbjct: 1415 NVSSIEDETSTMPLKASQPTNPGAPSNHAPQVVPPAPMHAV----APVQPKAPGMVTNAP 1470
Query: 607 APRTSRGPPPAVGYVGSGQP 666
AP ++ PP V + P
Sbjct: 1471 APSSAPAPPAPVSQLPPAVP 1490
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 7.8
Identities = 25/85 (29%), Positives = 30/85 (35%)
Frame = +1
Query: 385 RAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCAPHPPTTCSRAPYVRARIHRR 564
R + P P P P PP LP G P AP P + AP + A +
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPM----GAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 565 PGWPRTAWRWRSRDAPRTSRGPPPA 639
P P A AP + P PA
Sbjct: 467 PPLPPAA------PAPPPAPAPAPA 485
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,252,478
Number of Sequences: 5004
Number of extensions: 43181
Number of successful extensions: 212
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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