Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_D18
         (646 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              24   1.1  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   1.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   2.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   3.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.8  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   7.7  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    21   7.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.7  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 552 LQITNIFQCYTKY 590
           L+IT IFQC TK+
Sbjct: 114 LKITKIFQCITKF 126


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 475 HNLKGNGMDVTQNKNDTISVLFIKNVYKSQIFSNAIQNILIPLAV 609
           +NL     D  +N    +SVL +  ++   IF +   NIL+ +A+
Sbjct: 6   NNLTDGKEDQPENTFSLLSVLLVGFLFLILIFLSVAGNILVCVAI 50


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 245 LETPSSVSVNPKPFMKSS-SLTDL*YNLLMYVHNTYNMLK 129
           L + S   VN KPFMKS     ++ Y  +  + NT ++ K
Sbjct: 271 LSSRSLYYVNTKPFMKSEYGANNVQYQGVQDIFNTESIAK 310


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = -2

Query: 363 VTWLPLCCPFNYSPLYISSLIF 298
           VTW   C  FN  P Y   + +
Sbjct: 183 VTWYSQCVTFNAFPTYTHEITY 204


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +1

Query: 478 NLKGNGMDVTQNKNDTISVLFIKNVYKSQIFSNAIQNI 591
           NLK + ++ ++NKN     L +K  + ++   N   NI
Sbjct: 81  NLKCSLVEFSENKNCNAGSLTVKKNFANKYCGNITLNI 118


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 460 INTNLHNLKGNGMDVTQNKN 519
           +  NLHN +  GMD + N++
Sbjct: 355 VGENLHNHQSFGMDFSLNED 374


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 278 TYSYVFLNISDEIYN 322
           T+S VF  I +EI+N
Sbjct: 228 TFSLVFTKIDNEIFN 242


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -2

Query: 231 ISFCESETLYEKLIFDRFMI*FTHVCTQYI*YVKKTCANRGLLCN 97
           ++    E L  K IFD  ++  T +  + +  +KK   N G++ N
Sbjct: 98  VTLQNDEVLDWKKIFDINLLGLTCMIQEVLKLMKKKGINNGIIVN 142


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 524 QYLFYLLKTSTNHKYFPMLYKIF*FHWPFNVYALTT 631
           ++L YL+ +ST   Y P+   +F ++  +    + T
Sbjct: 202 EHLGYLIFSSTISFYLPLFVMVFTYYKIYRAAVIQT 237


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,756
Number of Sequences: 438
Number of extensions: 3807
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)