Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_D17
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026214-5|AAB71310.1|  525|Caenorhabditis elegans Hypothetical ...   256   2e-68
AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical ...   148   4e-36
U80837-1|AAB37900.1|  103|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AC006680-10|AAK72297.2|  335|Caenorhabditis elegans Seven tm rec...    28   8.3  

>AF026214-5|AAB71310.1|  525|Caenorhabditis elegans Hypothetical
           protein F52H2.6 protein.
          Length = 525

 Score =  256 bits (626), Expect = 2e-68
 Identities = 111/223 (49%), Positives = 153/223 (68%), Gaps = 1/223 (0%)
 Frame = -1

Query: 760 GVXMLGDMVDEVG-RDGKLNPIGVWHAEWXFKQVEKHLKRKRTAIEYIPLRDYYHRHTRS 584
           G  MLG+  D     D  +NPIG W+ +W +  VE  + +K  +IEYIPLRDYYHRH++S
Sbjct: 284 GCIMLGEFSDGPDTHDEVVNPIGRWYKKWFYTHVEDLINKKHESIEYIPLRDYYHRHSKS 343

Query: 583 LFWELQDIISFGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELL 404
           +FWEL+DI+ FGNN +FRYL  W+ PP+++ LK T P  + KLY+++HV+QDML+P++ L
Sbjct: 344 IFWELRDIVPFGNNVLFRYLMAWMCPPKIAFLKATTPNVLRKLYDRSHVLQDMLVPLDKL 403

Query: 403 EKAIAFFHDEFEVYPIWLCPFKIFNNPGQLKIKPGEESQMFVDIGVYGVPKAKGFETIAS 224
           E+ I  FH E E+YP+WLCPF + + PG +K++     +M+VD+G YGV    G+    +
Sbjct: 404 EECIDLFHKEVEIYPMWLCPFYLKSQPGLMKLR-NATHKMYVDVGAYGVTSKDGYHHERT 462

Query: 223 TRHVESFVIQNQGFQMLYADTYTTREEFRQMFDHKLYDRVRAS 95
           TR +ESFV    GFQM YAD Y TR E+ +MFD  LYD  RAS
Sbjct: 463 TRRLESFVRSVNGFQMTYADIYMTRAEYAEMFDRTLYDWKRAS 505


>AL034489-1|CAA22461.1|  538|Caenorhabditis elegans Hypothetical
            protein Y7A5A.1 protein.
          Length = 538

 Score =  148 bits (359), Expect = 4e-36
 Identities = 83/247 (33%), Positives = 136/247 (55%), Gaps = 16/247 (6%)
 Frame = -1

Query: 757  VXMLGDMVDEVGR-DGKLNPIGVWHAEWXFKQVEKHLKRKRTAIEYIPLRDYYHRHTRSL 581
            V M+G+  D   + + K+N +  ++  W +K VE  LK+     EYIPL  Y  RH R++
Sbjct: 271  VIMVGNFADVDSKSNAKVNDVCWFYKPWFYKHVETFLKKGGE--EYIPLESYLLRHNRAI 328

Query: 580  FWELQDIISFGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLE 401
            FW ++ +I FGN+ +FR   GWL PP+ + LK T  +AV ++     V QD+++P++ L+
Sbjct: 329  FWVVESMIPFGNHPVFRAFLGWLCPPKPAFLKFTTTQAVREMTFAKQVFQDIVMPLDTLK 388

Query: 400  KAIAFFHDEFEVYPIWLCPFKIFNN-----PGQL------KIKPGEESQMFVDIGVYGVP 254
            + +      F+ YP+ + P +I+++      GQL      ++ PG    MF D+GVYG P
Sbjct: 389  EQVDTAVKLFDTYPLLVYPCRIYDHKGGAPQGQLRAPPKSRLVPGTNYSMFNDLGVYGTP 448

Query: 253  ----KAKGFETIASTRHVESFVIQNQGFQMLYADTYTTREEFRQMFDHKLYDRVRASLPN 86
                + + +    + R +E F     G+  LYAD + + EEF +MFD  LY++VR    +
Sbjct: 449  GQVERREPYNPTHAMRAMEKFTRDVGGYSFLYADIFMSEEEFNEMFDMTLYNQVRLRY-H 507

Query: 85   XQGSLPR 65
              G+ PR
Sbjct: 508  CDGAFPR 514


>U80837-1|AAB37900.1|  103|Caenorhabditis elegans Hypothetical
           protein F07E5.4 protein.
          Length = 103

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -1

Query: 757 VXMLG-DMVDEVGRDGKLNPIGVWHAEWXFKQVEKHLKRKRT 635
           + M G D V E G  GK  P G +  E   K++  HLK+KR+
Sbjct: 39  IVMAGKDQVQEFG--GKKPPSGKYTIELMGKKIPNHLKKKRS 78


>Z81479-6|CAB03938.1|  411|Caenorhabditis elegans Hypothetical
           protein C34F6.7 protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = -1

Query: 523 FGWLMPPEVSL--LKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAIAFFHDEFEVYPIWL 350
           F  + PPE  L  L LT  +  T LYN      D    +E   K +AFFH     YP  +
Sbjct: 46  FALVFPPEELLDGLGLTLFDLFTILYNSRQ--HDF---VEYAAKRVAFFHAFVAFYPCVI 100

Query: 349 CPFKIFNN 326
             + +  N
Sbjct: 101 AAYFVHGN 108


>AC006680-10|AAK72297.2|  335|Caenorhabditis elegans Seven tm
           receptor protein 41 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -1

Query: 553 FGNNFIFRYLFGWLMPPEVSLLKLTQPEAVTKLYNKAHVIQDMLIPIELLEKAI 392
           FG  F   Y F + +   +S+L LT P+  T  Y +A +I+   + IE + + +
Sbjct: 133 FGVIFWILYPFLYGVVNSLSILFLTSPDGFTDDYLRAEIIEKYELDIENIARLV 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,761,516
Number of Sequences: 27780
Number of extensions: 379841
Number of successful extensions: 1018
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)