Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_D16
(510 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 204 3e-53
04_01_0103 + 1082077-1082167,1083037-1085477 202 2e-52
01_06_0662 + 30987187-30987277,30987825-30990214 180 6e-46
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 173 5e-44
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 150 7e-37
03_05_0511 + 25056018-25059107 95 2e-20
02_04_0148 - 20198407-20201424 93 9e-20
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 52 3e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 3e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 38 0.006
11_06_0768 + 27129007-27129038,27129140-27129220,27129723-271300... 37 0.011
01_04_0109 + 16112581-16112934 32 0.23
09_06_0142 - 21107878-21109104 28 3.8
01_06_0456 + 29521282-29522064 27 6.6
10_01_0360 - 3970796-3971248,3972080-3972436 27 8.8
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 204 bits (498), Expect = 3e-53
Identities = 92/135 (68%), Positives = 110/135 (81%)
Frame = -2
Query: 509 DAIHRGGGQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 330
DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVF
Sbjct: 697 DAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVF 756
Query: 329 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKP 150
EE Q GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ DP E S+
Sbjct: 757 EEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEAGSQA 816
Query: 149 YNVVQETRKRKGLKE 105
+VQ+ RKRKGLKE
Sbjct: 817 STLVQDIRKRKGLKE 831
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 202 bits (492), Expect = 2e-52
Identities = 91/135 (67%), Positives = 109/135 (80%)
Frame = -2
Query: 509 DAIHRGGGQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 330
DAIHRGGGQ+IPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIYGVLN++RGHVF
Sbjct: 697 DAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYLVEIQAPENALGGIYGVLNQKRGHVF 756
Query: 329 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKP 150
EE Q GTP++ +KAYLPV ESFGF++ LR+ T GQAFPQCVFDHW ++ DP E S+
Sbjct: 757 EEMQRPGTPLYNIKAYLPVIESFGFSSQLRAATSGQAFPQCVFDHWDMMTSDPLEVSSQA 816
Query: 149 YNVVQETRKRKGLKE 105
+V + RKRKGLKE
Sbjct: 817 NQLVLDIRKRKGLKE 831
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 180 bits (438), Expect = 6e-46
Identities = 82/119 (68%), Positives = 97/119 (81%)
Frame = -2
Query: 509 DAIHRGGGQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 330
DAIHRGGGQIIPT RR +YA LTA+PRL+EPVYL EIQ PE A+GGIY VLN++RGHVF
Sbjct: 695 DAIHRGGGQIIPTARRVIYAAQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVF 754
Query: 329 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSK 153
EE Q GTP++ +KAYLPV ESFGFT+ LR+ T GQAFP VFDHW++L DP EP ++
Sbjct: 755 EEMQRPGTPLYNIKAYLPVIESFGFTSTLRAATSGQAFPLFVFDHWEMLSVDPLEPGTR 813
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 173 bits (422), Expect = 5e-44
Identities = 77/135 (57%), Positives = 98/135 (72%)
Frame = -2
Query: 509 DAIHRGGGQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 330
D+IHRGGGQ+IPT RR +YA LTA PRLMEP+Y +IQ P+ AVG +YGVLN R G +
Sbjct: 707 DSIHRGGGQLIPTARRAMYAAQLTASPRLMEPMYQVDIQVPKTAVGNVYGVLNSRNGELV 766
Query: 329 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPCEPQSKP 150
EES+ GTP+ ++ YLPV +SF FT LR+ T GQAFPQC+F HWQ + DP + S+
Sbjct: 767 EESERTGTPLSNLRFYLPVAKSFDFTEKLRAETSGQAFPQCIFHHWQTMRSDPFQEGSEA 826
Query: 149 YNVVQETRKRKGLKE 105
V+ + RKRKGLK+
Sbjct: 827 AKVITDIRKRKGLKD 841
>06_03_0715 - 23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 150 bits (363), Expect = 7e-37
Identities = 78/147 (53%), Positives = 95/147 (64%), Gaps = 12/147 (8%)
Frame = -2
Query: 509 DAIHRGGGQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVF 330
+ +HRGGGQIIPT RR +Y+ L A PRLMEPVY EIQ P V IY VL+RRRGHV
Sbjct: 823 EPLHRGGGQIIPTARRVVYSAFLMANPRLMEPVYYIEIQTPIDCVSAIYTVLSRRRGHVT 882
Query: 329 EESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGD-------- 174
+ GTP+++VKA+LPV ESFGF DLR +T GQAF VFDHW ++PGD
Sbjct: 883 ADVPKPGTPIYVVKAFLPVIESFGFETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKNIVL 942
Query: 173 -PCEP---QSKPYNVVQETRKRKGLKE 105
P EP Q + +TR+RKG+ E
Sbjct: 943 RPLEPAPIQHLAREFMVKTRRRKGMSE 969
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 95.5 bits (227), Expect = 2e-20
Identities = 44/106 (41%), Positives = 60/106 (56%)
Frame = -2
Query: 488 GQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 309
GQ+I + + +PRL+E +Y CE+ P +G Y VL+R+R V +E G
Sbjct: 867 GQVITAVKEACREAVVQNKPRLVEAMYFCELTTPTEQLGATYAVLSRKRARVLKEEMQEG 926
Query: 308 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 171
T +F V AYLPV ES GF+ +LRS T G A V HW+ +P DP
Sbjct: 927 TSLFTVHAYLPVAESVGFSNELRSVTAGAASALLVLSHWEAIPEDP 972
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 93.5 bits (222), Expect = 9e-20
Identities = 45/106 (42%), Positives = 58/106 (54%)
Frame = -2
Query: 488 GQIIPTXRRCLYACXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAG 309
GQII R A L ++PRL+EP+Y CE+ P +G +Y VL R V +E G
Sbjct: 843 GQIITAVREACQAAILESKPRLVEPMYFCELTTPTEQLGSMYAVLGNCRARVLKEEMQEG 902
Query: 308 TPMFIVKAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDP 171
T +F V AYL V ES F+ LR+ T G A F HW+ +P DP
Sbjct: 903 TSLFTVHAYLSVAESSEFSKKLRNATAGAASALLAFSHWETVPQDP 948
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 52.0 bits (119), Expect = 3e-07
Identities = 30/86 (34%), Positives = 45/86 (52%)
Frame = -2
Query: 437 AQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFG 258
A PRL+EP+ E+ PE +G + G LN RRG V G + +V A++P+ E F
Sbjct: 647 AGPRLLEPIMKVEVITPEEHLGDVIGDLNSRRGQVNSFGDKPG-GLKVVDAFVPLAEMFQ 705
Query: 257 FTADLRSNTGGQAFPQCVFDHWQVLP 180
+ + LR T G+A + V+P
Sbjct: 706 YVSTLRGMTKGRASYTMQLAKFDVVP 731
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 48.4 bits (110), Expect = 3e-06
Identities = 24/76 (31%), Positives = 41/76 (53%)
Frame = -2
Query: 449 CXLTAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVN 270
C A+P ++EPV E++ P G + G +N+R+G + Q +V ++P+N
Sbjct: 665 CYAAARPVILEPVMKVELKVPTEFQGTVTGDMNKRKGIIVGNDQEGDDT--VVVCHVPLN 722
Query: 269 ESFGFTADLRSNTGGQ 222
FG++ LRS T G+
Sbjct: 723 NMFGYSTALRSMTQGK 738
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/89 (22%), Positives = 38/89 (42%)
Frame = -2
Query: 440 TAQPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESF 261
T +L EP + ++ PE +G + +L +RRG + + ++K +P
Sbjct: 497 TVDGKLQEPYEIAAVEVPEEYMGSVVELLGKRRGQMVDMQPSGPEGTTLLKYKIPTRGLI 556
Query: 260 GFTADLRSNTGGQAFPQCVFDHWQVLPGD 174
G + + + G A +FD + GD
Sbjct: 557 GLRNAVLTASRGTAILNTIFDSYGPWAGD 585
>11_06_0768 +
27129007-27129038,27129140-27129220,27129723-27130089,
27130165-27130255,27130515-27130595,27130764-27131830,
27132060-27132071,27132465-27133209,27133210-27135244,
27135712-27135787,27135925-27136029,27137080-27137166
Length = 1592
Score = 36.7 bits (81), Expect = 0.011
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -3
Query: 268 SRSVLLPICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGKD 113
S S +P +P P D PS+ +T G S+ +N SP+ +Y K G D
Sbjct: 19 STSARVPGVIPKPIDLPSQRGTATQGDKSMPPASNAWGSPSVMYPKNGGGSD 70
>01_04_0109 + 16112581-16112934
Length = 117
Score = 32.3 bits (70), Expect = 0.23
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = -3
Query: 271 MSRSVLLP--ICVPTPADRPSRSAYSTIGRSSLETRANLRASPTTLYRKRERGK 116
M+ VL P + +P+PA R R+ +T R++ +++ R PTT +R +G+
Sbjct: 1 MATEVLRPHNVLLPSPAQRRIRATAATHQRTANNHQSDARTKPTTAGSRRRQGR 54
>09_06_0142 - 21107878-21109104
Length = 408
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 147 VGLALRFARVSREDLPMVEYALREGLS-AGVGTQIGSKTER 266
V L L++ E LP++ A REG++ AGV +GS R
Sbjct: 171 VDLGLKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASR 211
>01_06_0456 + 29521282-29522064
Length = 260
Score = 27.5 bits (58), Expect = 6.6
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 143 RCRACSEVRTGLQGGPANGRIRTAGRPVRRCWNANR 250
R C +G +GG R R AG RRC A+R
Sbjct: 11 RAWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADR 46
>10_01_0360 - 3970796-3971248,3972080-3972436
Length = 269
Score = 27.1 bits (57), Expect = 8.8
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = -2
Query: 485 QIIPTXRR--CLYACXLTAQPRLMEPVYLC--EIQCPEVAVGGIYGVLNRRRGHV 333
Q IP RR + AQ RL +PVY C I + V G+ LN +GH+
Sbjct: 80 QQIPAHRRLDAVVTICYEAQARLRDPVYGCVAHIFHLQHQVAGLQSELNYLQGHL 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,757,685
Number of Sequences: 37544
Number of extensions: 327087
Number of successful extensions: 883
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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