Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_D16
         (510 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    25   1.1  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    25   2.0  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.0  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.9  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    23   7.9  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.9  

>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 225 TGLPAVRIRPLAGPPWRPVRTSEQALQRCTGNEKEERIE 109
           +G+P +R    AG     V  + + LQR    EKEE+++
Sbjct: 27  SGIPTLRAPMAAGNAGSVVSKTVEDLQRSLAAEKEEKMK 65


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = +2

Query: 134 PVQRCRACSEVRTGLQGGPANGRIRTAGRPVRRCWN 241
           P +R   C   R GL G   +G    +G P    W+
Sbjct: 108 PAERISFCYTERMGLDGSTGHGCNAKSGNPFGPFWD 143


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 315 GRYTYVHCEGLPTC 274
           GRYT  +CE  PTC
Sbjct: 664 GRYTGRYCEKCPTC 677


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -3

Query: 289 RPTYLSMSRSVLL-PICVPTPADRPSRSAYSTIGRSSLETRANLRASPT 146
           RP  L+   S L  P  +P  A RP   +  +  RS+ + RAN +   T
Sbjct: 586 RPNALASPASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPET 634


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 242 RSNTGGQAFPQCVFDHWQVLPGDPCE 165
           + N  G+   +C   +W ++ G+ CE
Sbjct: 912 KPNVIGRTCNECKNGYWNIVSGNGCE 937


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 360 CAEQTSWSRFR 328
           CAE+ SW RFR
Sbjct: 518 CAEKGSWIRFR 528


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 323 TLRKRDHDVCSAHRKYHP 376
           T+ +  H+ CS+H + HP
Sbjct: 385 TVGQWKHEGCSSHERLHP 402


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 265 RSVLLPICVPTPADRPSRSAYSTIGRSSLETRANL 161
           +++ + +C+PTP +R + + Y  + R  + T  NL
Sbjct: 227 KALTVRLCLPTPPNRLTNNGYWQL-RPHVLTERNL 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,891
Number of Sequences: 2352
Number of extensions: 12245
Number of successful extensions: 19
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)