Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_D12
         (346 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   1.3  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   1.3  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   2.3  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    20   7.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 218 DQYLNIKLSDISVIDSEKYPHMLSVKNC 135
           D Y N+ L +I  I + +YP   S   C
Sbjct: 43  DYYQNLNLGEIYYIYNPRYPLPYSGSKC 70


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = -3

Query: 191 DISVIDSEKYPHMLSVKNCFIRGSVVRYVQLPADEGDTQLXPGCREKGGDRCNKRELNRT 12
           DIS+   ++  H L V  C+   S V      +DE  T        KG D  N  E N +
Sbjct: 227 DISLTTHQQKRHKLRVTRCYSSDSAVL-----SDEDQT--------KGWDGSNMVEGNES 273

Query: 11  DH 6
           DH
Sbjct: 274 DH 275


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 14  FGSVLSCCNGRLLSRGILVAAGCLPHQPAVVRIEP 118
           F  V   C+GR L    +V + C P+   +++  P
Sbjct: 31  FVDVTLACDGRSLKAHRVVLSACSPYFRELLKSTP 65


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
 Frame = +2

Query: 113 EPR--SLL*NNFSLITYEDTFQSQSRLYPKALY*DIDPQNATSHIC*GHFSARRLHPY 280
           EP+  S L NN+    Y +      +LY K    +I+       I  G+F  R + P+
Sbjct: 78  EPKIISSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQIPVPVPIYCGNFPPRPMGPW 135


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,476
Number of Sequences: 438
Number of extensions: 1722
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)