Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_D11
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 297 7e-82
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 146 3e-36
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 130 2e-31
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 118 1e-27
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 95 9e-21
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 76 4e-15
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 73 3e-14
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 69 5e-13
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 44 2e-05
SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr... 28 1.5
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 28 1.5
SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces ... 27 1.9
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 1.9
SPAC9E9.15 |||CIA30 family protein|Schizosaccharomyces pombe|chr... 27 1.9
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 27 3.4
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 27 3.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 4.5
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 26 4.5
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 26 5.9
SPAC1B3.17 |clr2||chromatin silencing protein Clr2|Schizosacchar... 25 7.8
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 25 7.8
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 297 bits (730), Expect = 7e-82
Identities = 139/158 (87%), Positives = 146/158 (92%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQE+ TAA SSSLEKSYELPDGQVITIGNERFR PEALFQPS LG+E GIHE
Sbjct: 218 YVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSALGLENAGIHEA 277
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
TYNSIMKCDVDIRKDLY N V+SGGTTMYPGIADRMQKEI ALAPS+MK+KI+APPERKY
Sbjct: 278 TYNSIMKCDVDIRKDLYGNVVMSGGTTMYPGIADRMQKEIQALAPSSMKVKIVAPPERKY 337
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGP IV+RKCF
Sbjct: 338 SVWIGGSILASLSTFQQMWISKQEYDESGPGIVYRKCF 375
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 146 bits (353), Expect = 3e-36
Identities = 67/158 (42%), Positives = 102/158 (64%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DF E+ + +Y+LPD Q IT+G E F PE LF P +G EA+G+H
Sbjct: 223 YVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEMMGSEASGLHIQ 282
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+ SI+ D+D+R LY+N VLSGG+T+ G +R E+ A++ ++KI A PER +
Sbjct: 283 LFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYASPERMH 342
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
+ W+GGSILASLSTF+++ I+ +EY ++ +++ R+ F
Sbjct: 343 NAWLGGSILASLSTFRRLLITSEEY-KNDQNVIFRRRF 379
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 130 bits (314), Expect = 2e-31
Identities = 67/161 (41%), Positives = 102/161 (63%), Gaps = 12/161 (7%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YV+ D E + + ++ L ++Y LPDG+VI +G+ER+ CPE LFQP +G E G+ E
Sbjct: 218 YVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECLFQPHLVGSEQPGLSEF 277
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--------APSTM---K 364
+++I DVDIRK LY VLSGG++MY G+ R++KEI L P+ + K
Sbjct: 278 IFDTIQAADVDIRKYLYRAIVLSGGSSMYAGLPSRLEKEIKQLWFERVLHGDPARLPNFK 337
Query: 363 IKIIAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESG 244
+KI P R+++V+IGG++LA ++ MW+SK E++E G
Sbjct: 338 VKIEDAPRRRHAVFIGGAVLADIMAQNDHMWVSKAEWEEYG 378
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 118 bits (283), Expect = 1e-27
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 11/148 (7%)
Frame = -1
Query: 654 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAN---------GIHETTYN 502
A +SS K +E PDG G ERFR E LF PSF + G+HE Y
Sbjct: 271 AKASSRNPKPFEFPDGVTHKFGQERFRISEILFNPSFSASRSAETTPPQGSVGLHELVYQ 330
Query: 501 SIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-STMKIKII-APPERKYS 328
SI+ CD ++R L N V++GGT++ PG+++R+Q E+ LA S + + +
Sbjct: 331 SILACDSELRSPLLNNIVVTGGTSLIPGLSERLQAEVQRLATGSRINVHTAETASATSNA 390
Query: 327 VWIGGSILASLSTFQQMWISKQEYDESG 244
VW GGSILASL FQ +W+SKQEYDE G
Sbjct: 391 VWFGGSILASLDNFQHLWVSKQEYDEVG 418
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 95.1 bits (226), Expect = 9e-21
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = -1
Query: 525 GIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 346
GI + N I +CDVDIR L N ++ GGT++ G + R+Q E++ L P + ++KI A
Sbjct: 326 GIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGS-RLKIHAS 384
Query: 345 P---ERKYSVWIGGSILASLSTFQQMWISKQEYDESGP---SIVHRKC 220
ER Y+ W+GGSIL+SL TF Q+WIS+QEY+E G +++ ++C
Sbjct: 385 GHVVERSYASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRC 432
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 76.2 bits (179), Expect = 4e-15
Identities = 42/128 (32%), Positives = 64/128 (50%)
Frame = -1
Query: 606 QVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTM 427
QV+ + NERF PE LF PS + + GI E S+ +I+ L N V GG
Sbjct: 272 QVLNLSNERFMIPELLFSPSDIEIREAGIPEAVMQSVTHFPENIQAMLLENVVTIGGNCK 331
Query: 426 YPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDES 247
+PG R+ E+ +LAP+ ++K+ P + W S + L + I++ EY E
Sbjct: 332 FPGFHKRLSSELRSLAPANWEVKVFEPSDPICFPWKKASHM-PLEHWNANKITRSEYSEH 390
Query: 246 GPSIVHRK 223
G +I+ RK
Sbjct: 391 GANIMTRK 398
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 73.3 bits (172), Expect = 3e-14
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Frame = -1
Query: 600 ITIGNERFRCPEALFQPSFLGME-ANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 424
I +G ERF PE F P + + E N + +D+RK LY N VLSGG+T++
Sbjct: 280 IDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLF 339
Query: 423 PGIADRMQKEITALAPST--------------MKIKIIAPPERKYSVWIGGSILASLSTF 286
+R+Q+++ + + + +I+ ++ +VW GGS+LA F
Sbjct: 340 KNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEF 399
Query: 285 QQMWISKQEYDESGPSIVHR 226
+K +Y+E G SI R
Sbjct: 400 GSYCHTKADYEEYGASIARR 419
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 69.3 bits (162), Expect = 5e-13
Identities = 31/118 (26%), Positives = 62/118 (52%)
Frame = -1
Query: 585 ERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADR 406
E+ R PE +F PS +G++ GI E + + + ++ ++ L +N +++GG PG+ R
Sbjct: 594 EQIRVPEVIFSPSIVGIDQAGILEIMRSILQRHSLEEQQKLVSNVLITGGLGSLPGMETR 653
Query: 405 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIV 232
+++E+T++ P I + W G S + F+ ++++EY E GP +
Sbjct: 654 IKRELTSIMPVGSSINVFRASNPLLDAWKGASEWSVTEKFKAAKVTREEYLEKGPEYI 711
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 44.4 bits (100), Expect = 2e-05
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -1
Query: 471 KDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILA 301
K+LY++ ++ GG +PG A +++ I + + I +I PP + ++ W G I
Sbjct: 527 KNLYSSILIVGGAGQFPGFAHLLEERIHSKRANIPTISVIPPPRSMDAQFVAWKGACIYN 586
Query: 300 SLSTFQQMWISKQEYDESGPSIVHRK 223
+ ++WI ++ G ++ K
Sbjct: 587 RIRIVSELWIKNSDWKMLGSRVLQYK 612
>SPAC1783.01 |||FAD binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 583
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = -2
Query: 683 LSTSSRRWPPL--HPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWV 537
LS + WP L HP P R P++ + P +T S + S +P S+V
Sbjct: 107 LSDLQKHWPSLKPHPLPPKRVSLGIPSISNPPVDTVISDSP-TSPHPPSFV 156
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/37 (32%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = -1
Query: 324 WIGGSILASLSTFQQM---WISKQEYDESGPSIVHRK 223
++GGSI+A S + + +++ +EY + GP+ +H K
Sbjct: 486 FLGGSIVAKTSFNESVSSHYVTLEEYAQHGPTAIHTK 522
>SPCC962.01 ||SPCP31B10.09|C2 domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1429
Score = 27.5 bits (58), Expect = 1.9
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 677 TSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPT-ASTKP 510
TS R PP + + SL N P RSS E D V + P + K + A+ KP
Sbjct: 47 TSIARRPPSTVGSQTGSLVNAPPKRSSGIERFDHVTGTAENRPQTPSTKASVANVKP 103
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTPS 495
PP+ +PS SL P S + + S R ++ S + KP+ P T S
Sbjct: 217 PPIEEYSPSVSLPTSPVAEESYNNVQRSSTVRNNTTQKSVLKKPSRKMSPAYTSS 271
>SPAC9E9.15 |||CIA30 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/73 (24%), Positives = 33/73 (45%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
++ D Q+ T+ SSL SYE + + ++ P + F+P++ G G E
Sbjct: 94 FIIKDCHQDWETSDEKSSL--SYEYDFTPIYSKEDQVVSIPFSEFKPTYRGRPVEGAPEL 151
Query: 510 TYNSIMKCDVDIR 472
+ I + + IR
Sbjct: 152 DVSKITQFSIMIR 164
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.6 bits (56), Expect = 3.4
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = -1
Query: 678 DFEQEMATAASSSSLEKSY--ELPDGQ-VITIGNERFRCPEALFQPSFLG-MEANGIHET 511
D E++ SS+ + +Y + + Q ++T+ NE + E L S + E+
Sbjct: 108 DDHPEISGHVSSNDKDFAYFEDKSENQPLVTLPNENNQVIEPLSSQSCKSQLSTQNYSES 167
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+ CD+D ++ + + T ++P AD I ++K A RKY
Sbjct: 168 DFGWNQLCDLD---PIFKSLAFTDDTNLFPAFADSEAALIMLKKREMTRVKHRAGRPRKY 224
Query: 330 S 328
S
Sbjct: 225 S 225
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 659 PPLHPAA-PSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPH 507
PP HPA+ SR + ++ TV+SSPS T ++L + P + T S+ P+
Sbjct: 75 PPQHPASINSRRVASY-TVQSSPSRT---TYRQLPNEPQNSAAYTTYSSFPN 122
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = -2
Query: 689 TSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKP 510
+SLS+SS ++ S +++ + SSP+ T +++ SS+ T S+
Sbjct: 252 SSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSS 311
Query: 509 HTTPS*SATWTS 474
++ S S+T +S
Sbjct: 312 SSSSSFSSTLSS 323
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1576 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 488 AT 483
T
Sbjct: 1636 PT 1637
Score = 26.2 bits (55), Expect = 4.5
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1597 PSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 488 AT 483
T
Sbjct: 1657 PT 1658
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTPS*SAT 483
P P +PS S T+ +SPS + S S +P S + PT+ + T+PS S T
Sbjct: 1590 PSYSPTSPSYSPTSPSYSATSPSYSPTSP----SYSPTSPSYSPTSPSYSPTSPSYSPT 1644
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1611 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 488 AT 483
T
Sbjct: 1671 PT 1672
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1618 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 488 AT 483
T
Sbjct: 1678 PT 1679
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1625 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 488 AT 483
T
Sbjct: 1685 PT 1686
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1632 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1691
Query: 488 AT 483
T
Sbjct: 1692 PT 1693
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1698
Query: 488 AT 483
T
Sbjct: 1699 PT 1700
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1646 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1705
Query: 488 AT 483
T
Sbjct: 1706 PT 1707
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1653 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1712
Query: 488 AT 483
T
Sbjct: 1713 PT 1714
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1660 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1719
Query: 488 AT 483
T
Sbjct: 1720 PT 1721
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1667 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1726
Query: 488 AT 483
T
Sbjct: 1727 PT 1728
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1674 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1733
Query: 488 AT 483
T
Sbjct: 1734 PT 1735
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1681 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1740
Query: 488 AT 483
T
Sbjct: 1741 PT 1742
Score = 25.4 bits (53), Expect = 7.8
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + +S +P S + PT+ + T+PS S
Sbjct: 1688 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1747
Query: 488 AT 483
T
Sbjct: 1748 PT 1749
>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 25.8 bits (54), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 399 KEITALAPSTMKIKIIAPPERKYSVWIGGSILASLST 289
KEI++ A S + + + P E+ W ILA L+T
Sbjct: 212 KEISSQARSNIALPTLRPQEKNLIDWRDRKILAPLTT 248
>SPAC1B3.17 |clr2||chromatin silencing protein
Clr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 7.8
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = -3
Query: 442 RWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPLYLPTDVDLET 263
RWY PW + KG+ + +E + SSR + + W+D YL +++D+ +
Sbjct: 483 RWYE--PW----FVKGDLN---YTSEVKERTSSRLSAVGSENWVDDDFYEYLLSEIDMVS 533
Query: 262 GV 257
V
Sbjct: 534 AV 535
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 650 HPAAPSRSLTNFPTVRSSPSETKDSV 573
HPA+ SLTN ++ + P+ D +
Sbjct: 131 HPASVENSLTNVNSIHAQPTTISDMI 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,803,211
Number of Sequences: 5004
Number of extensions: 59423
Number of successful extensions: 273
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 248
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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