Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_D11
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 324 3e-89
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 324 3e-89
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 324 3e-89
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 324 3e-89
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 324 3e-89
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 324 3e-89
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 324 5e-89
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 324 5e-89
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 324 5e-89
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 318 3e-87
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 307 4e-84
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 155 3e-38
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 142 3e-34
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 121 6e-28
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 103 2e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 3e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 71 8e-13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 71 8e-13
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.59
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.59
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.59
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 30 1.4
AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical ... 29 2.4
Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 29 4.1
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 28 5.5
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 28 7.2
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 28 7.2
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 27 9.6
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 27 9.6
AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical ... 27 9.6
AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical ... 27 9.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 324 bits (797), Expect = 3e-89
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (797), Expect = 3e-89
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (797), Expect = 3e-89
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 324 bits (797), Expect = 3e-89
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET
Sbjct: 175 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 234
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 235 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 294
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 295 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 324 bits (797), Expect = 3e-89
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET
Sbjct: 205 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 264
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 265 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 324
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 325 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 324 bits (797), Expect = 3e-89
Identities = 152/158 (96%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 324 bits (795), Expect = 5e-89
Identities = 151/158 (95%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 324 bits (795), Expect = 5e-89
Identities = 151/158 (95%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 324 bits (795), Expect = 5e-89
Identities = 151/158 (95%), Positives = 156/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 338
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 318 bits (780), Expect = 3e-87
Identities = 150/158 (94%), Positives = 155/158 (98%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFEQEMATAASSSSLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET
Sbjct: 219 YVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKY
Sbjct: 279 SYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKY 337
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 338 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 307 bits (754), Expect = 4e-84
Identities = 144/158 (91%), Positives = 149/158 (94%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
YVA DFE E+A AASSSSLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME GIHET
Sbjct: 218 YVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHET 277
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKY 331
TY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKY
Sbjct: 278 TYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKY 337
Query: 330 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 217
SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 338 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 155 bits (376), Expect = 3e-38
Identities = 71/147 (48%), Positives = 98/147 (66%)
Frame = -1
Query: 657 TAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHETTYNSIMKCDVD 478
T ++S++ SY LPD I I N FR PE LF+P +G E G+ SIMKCDVD
Sbjct: 228 TKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVD 287
Query: 477 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 298
+R+ LY+N VLSGGTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+AS
Sbjct: 288 LRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVAS 347
Query: 297 LSTFQQMWISKQEYDESGPSIVHRKCF 217
L TF++MW+ K+EY++ G S +H++ F
Sbjct: 348 LDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 142 bits (343), Expect = 3e-34
Identities = 72/162 (44%), Positives = 98/162 (60%), Gaps = 13/162 (8%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
Y+A D EQE A ++ L + Y LPDG+VI +G ERF PE LFQP + +E G+ E
Sbjct: 222 YIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSEL 281
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-----------APSTMK 364
+ I D+D R D Y + VLSGGTTMYPG+ R++KE+ L A K
Sbjct: 282 LFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFK 341
Query: 363 IKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDESG 244
I+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 342 IRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 121 bits (291), Expect = 6e-28
Identities = 60/143 (41%), Positives = 81/143 (56%), Gaps = 8/143 (5%)
Frame = -1
Query: 624 YELPDGQVITIGNERFRCPEALFQPSFLGMEANG-----IHETTYNSIMKCDVDIRKDLY 460
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 459 ANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLST 289
+N ++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL T
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGT 412
Query: 288 FQQMWISKQEYDESGPSIVHRKC 220
FQQMW+SK EYDESG SIV +KC
Sbjct: 413 FQQMWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 103 bits (246), Expect = 2e-22
Identities = 49/147 (33%), Positives = 87/147 (59%), Gaps = 3/147 (2%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFLGMEANGI 520
YV D+++E + + SL+ P Q I N RF C E LF+P G++ G+
Sbjct: 393 YVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKWGLDTKGL 452
Query: 519 HETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 340
H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ + P+T+ ++ P
Sbjct: 453 HQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPW 512
Query: 339 RKYSVWIGGSILASLSTFQQMWISKQE 259
R + ++G I+AS STF+ IS Q+
Sbjct: 513 RYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 92.3 bits (219), Expect = 3e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = -1
Query: 600 ITIGNERFRCPEALFQPSFLGME-ANGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 424
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 423 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 292
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 291 TFQQMWISKQEYDESGPSI 235
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 70.9 bits (166), Expect = 8e-13
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
Y+ DF ++P I +G ERF PE LF PS + ++ G+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPE 340
SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 339 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 235
W G L L+ + WI+++++DE G S+
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 70.9 bits (166), Expect = 8e-13
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Frame = -1
Query: 690 YVAXDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEANGIHET 511
Y+ DF ++P I +G ERF PE LF PS + ++ G+ E
Sbjct: 236 YIMPDFHSTFRGVVKDVKEPHDPQIPS---IHLGVERFAIPEILFNPSDIDIDQCGVAEA 292
Query: 510 TYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPE 340
SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ + + + P+
Sbjct: 293 VIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQ 352
Query: 339 RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 235
W G L L+ + WI+++++DE G S+
Sbjct: 353 T--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = -1
Query: 498 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 334
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 333 ----YSVWIGGSILASL-STFQQMWISKQEY 256
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 322 PYGVLPLWRSNDLNLHCRWGESCD 393
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 322 PYGVLPLWRSNDLNLHCRWGESCD 393
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.59
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 322 PYGVLPLWRSNDLNLHCRWGESCD 393
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Frame = -2
Query: 689 TSLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETK---DSVAQRLSSNPHSWVWKPTAS 519
T+ STS+ + P P P+ T+ PT+ PS + + LS+ P P +
Sbjct: 248 TTASTSTTKTSPTKPPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQP------PRRT 301
Query: 518 TKPHTTP 498
+PH P
Sbjct: 302 PQPHPKP 308
>AF026202-2|AAB71242.2| 501|Caenorhabditis elegans Hypothetical
protein C10E2.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 668 RRWPPLHPAAPSRSLTNFPTVRSSPSE 588
R+ PLHPA P L N P SSP+E
Sbjct: 144 RQRDPLHPAHPLLPLRNMPYDSSSPTE 170
>Z81568-3|CAB04592.1| 643|Caenorhabditis elegans Hypothetical
protein K08E3.4 protein.
Length = 643
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 674 SSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTA 522
S ++WPP+ +P R N T P E + ++ P V+KP A
Sbjct: 406 SPKKWPPVGTTSPPREPVNRLT---EPDEPSTYTPKPIAYEPEPMVYKPEA 453
>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical protein
T01D3.7 protein.
Length = 2882
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = -2
Query: 629 SLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTPS*SATW 480
S T+ T + SET + + +S P +W +++P T P ++TW
Sbjct: 2501 SETSTSTSSQTVSETDGTTSMFQTSEPSTWQTSNEPTSEPTTVPLETSTW 2550
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -2
Query: 686 SLSTSSRRWPPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPH 507
S ST + P AP+ S TN PT +SP + V+ SS P +++P
Sbjct: 242 STSTPAPTNLPTTTGAPTNSTTNPPTA-TSPKTSSQPVSSSTSSTSSPAPTNPPTTSRPT 300
Query: 506 TTPS*SAT 483
T +A+
Sbjct: 301 TASQSTAS 308
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 28.3 bits (60), Expect = 5.5
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 629 SLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTP 498
+L N + SP TKDS + ++ S KP TK TTP
Sbjct: 1198 NLFNASCILESPEPTKDSTSIDVNEVEPSRDQKPVVVTKDETTP 1241
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 641 APSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTPS*SAT 483
A S S + T ++PS + + S+N S PT S P P+ +AT
Sbjct: 287 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTAT 339
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = -2
Query: 641 APSRSLTNFPTVRSSPSETKDSVAQRLSSNPHSWVWKPTASTKPHTTPS*SAT 483
A S S + T ++PS + + S+N S PT S P P+ +AT
Sbjct: 269 ATSTSTSTASTTTTTPSTSTHTTTVTYSTNATSSTTSPTTSPTPEPEPTTTAT 321
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + SS +P S + PT+ T T+P+ S
Sbjct: 1631 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYS 1690
Query: 488 AT 483
T
Sbjct: 1691 PT 1692
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = -2
Query: 659 PPLHPAAPSRSLTNFPTVRSSPSETKDSVAQRLSS---NPHSWVWKPTASTKPHTTPS*S 489
P P +PS S T+ +SPS + S + SS +P S + PT+ T T+P+ S
Sbjct: 1638 PSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYS 1697
Query: 488 AT 483
T
Sbjct: 1698 PT 1699
>AL032647-1|CAA21688.2| 470|Caenorhabditis elegans Hypothetical
protein Y57A10B.1 protein.
Length = 470
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 565 LWATESFVSDGDDLTVGKFVRLLEGAAGCSGG 660
L++T SFVS T + + + G +GC GG
Sbjct: 7 LFSTASFVSPATTSTTTRCMEQVGGGSGCGGG 38
>AF125443-3|AAD12799.2| 414|Caenorhabditis elegans Hypothetical
protein H32C10.1 protein.
Length = 414
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 434 VPPDNTVLAYKSLRMSTSHFMMELYVVSWMPLASIPKNEGWKRASGQRNLSFP-MVMT*P 610
VP DN ++++ LRM T ++ VV +I K + R ++ + +V P
Sbjct: 85 VPADNVLMSHSPLRMFTDLHDKQVLVVGQKNARAIAKGIIFFRVGFKKVTTIDHLVKWFP 144
Query: 611 SGSS*DFSRELLD 649
DFSR+L+D
Sbjct: 145 HLDCTDFSRKLVD 157
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,726,939
Number of Sequences: 27780
Number of extensions: 340607
Number of successful extensions: 1156
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -