Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_D03
(756 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 184 2e-47
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 161 7e-41
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 154 1e-38
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 145 5e-36
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 111 8e-26
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 111 1e-25
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 107 2e-24
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 103 2e-23
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 98 1e-21
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 46 6e-06
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 45 1e-05
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 45 1e-05
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 39 7e-04
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 39 7e-04
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 39 9e-04
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 30 0.41
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 30 0.41
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 0.72
SPBC18E5.03c |sim4||kinetochore protein Sim4 |Schizosaccharomyce... 28 1.3
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 28 1.7
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 8.8
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 184 bits (447), Expect = 2e-47
Identities = 89/167 (53%), Positives = 118/167 (70%)
Frame = -1
Query: 735 RRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGYETNL 556
R+Q+ +V QEP L ++ ENI G + + V+ E++ A K ANIH FI+ LP GY T
Sbjct: 1194 RKQIALVSQEPTLYQGTVRENIVLGAS-KDVSEEEMIEACKKANIHEFILGLPNGYNTLC 1252
Query: 555 GANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
G G+ LSGGQKQR+ IARALIR+P++LLLDEATSALD+ SE+ V EAL A++GRT +
Sbjct: 1253 GQKGSSLSGGQKQRIAIARALIRNPKILLLDEATSALDSHSEKVVQEALNAASQGRTTVA 1312
Query: 375 IAHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMCRGQNM 235
IAHRLS+++DAD I V D G I E GTHAEL+ +G Y+ + Q +
Sbjct: 1313 IAHRLSSIQDADCIFVFDGGVIAEAGTHAELVKQRGRYYELVVEQGL 1359
Score = 169 bits (410), Expect = 5e-43
Identities = 87/181 (48%), Positives = 124/181 (68%), Gaps = 7/181 (3%)
Frame = -1
Query: 753 LTIPRXRRQLGVVQQEPVLLDRSLAENIAYG-DNNRKVTMHE------IVAAAKAANIHS 595
L + R Q+ +VQQEPVL ++ ENI YG + K T+ + + AAK AN +
Sbjct: 489 LNVASLRNQISLVQQEPVLFATTVFENITYGLPDTIKGTLSKEELERRVYDAAKLANAYD 548
Query: 594 FIVSLPKGYETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTE 415
FI++LP+ + TN+G G +SGGQKQR+ IARA+I P++LLLDEATSALD+ SE V +
Sbjct: 549 FIMTLPEQFSTNVGQRGFLMSGGQKQRIAIARAVISDPKILLLDEATSALDSKSEVLVQK 608
Query: 414 ALEKAAKGRTCITIAHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMCRGQNM 235
AL+ A++ RT I IAHRLST+++AD I V++ GKIVE+G+H EL+ + G Y R+ Q +
Sbjct: 609 ALDNASRSRTTIVIAHRLSTIRNADNIVVVNAGKIVEQGSHNELLDLNGAYARLVEAQKL 668
Query: 234 A 232
+
Sbjct: 669 S 669
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 161 bits (392), Expect = 7e-41
Identities = 81/162 (50%), Positives = 107/162 (66%)
Frame = -1
Query: 753 LTIPRXRRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPK 574
+T+ R +GVV Q+ L + ++ NI Y + T EI AAAKAA IH I+ P
Sbjct: 651 VTLSSLRSSIGVVPQDSTLFNDTILYNIKYAKPS--ATNEEIYAAAKAAQIHDRILQFPD 708
Query: 573 GYETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAK 394
GY + +G G +LSGG+KQRV +ARA+++ P ++LLDEATSALD ++ER + AL + A
Sbjct: 709 GYNSRVGERGLKLSGGEKQRVAVARAILKDPSIILLDEATSALDTNTERQIQAALNRLAS 768
Query: 393 GRTCITIAHRLSTVKDADLICVIDKGKIVERGTHAELISMKG 268
GRT I IAHRLST+ +ADLI I G+IVE GTH ELI G
Sbjct: 769 GRTAIVIAHRLSTITNADLILCISNGRIVETGTHEELIKRDG 810
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 154 bits (374), Expect = 1e-38
Identities = 75/173 (43%), Positives = 113/173 (65%), Gaps = 2/173 (1%)
Frame = -1
Query: 753 LTIPRXRRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPK 574
+T+ R+ +GVV Q+ L + ++ NI YG N K + EIV AAK A IH I S P+
Sbjct: 510 ITLNSLRKAIGVVPQDTPLFNDTILYNIGYG--NPKASNDEIVEAAKKAKIHDIIESFPE 567
Query: 573 GYETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAK 394
GY+T +G G +SGG+KQR+ ++R L+++P +L DEATSALD ++ERA+ + K
Sbjct: 568 GYQTKVGERGLMISGGEKQRLAVSRLLLKNPEILFFDEATSALDTNTERALLRNINDLIK 627
Query: 393 G--RTCITIAHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMCRGQ 241
G +T + IAHRL T+KD D+I V++KG++VE+G+H +L++ Y M Q
Sbjct: 628 GSHKTSVFIAHRLRTIKDCDIIFVLEKGRVVEQGSHEQLMAKNSVYTSMWHSQ 680
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 145 bits (352), Expect = 5e-36
Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 2/171 (1%)
Frame = -1
Query: 747 IPRXRRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGY 568
+ + R G+V QEPVL ++ ENIAYG +N + EI AAK AN SF++S P+ +
Sbjct: 553 VHQWRSHFGLVGQEPVLFSGTIGENIAYGKSN--ASQEEIEDAAKRANC-SFVLSFPEKW 609
Query: 567 ETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGR 388
T +G G QLSGGQKQR+ IARAL+R+P L+LDEATSALD +E V + ++ R
Sbjct: 610 STQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDEATSALDGEAEVMVDKTIQSLMHNR 669
Query: 387 --TCITIAHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMCRGQ 241
T ITIAH+L+T++ AD I V+ GK++E+G+ L +++++ R Q
Sbjct: 670 SMTTITIAHKLATIRRADQIIVVGDGKVLEQGSFERLSRPGTNFYKLMRWQ 720
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1465
Score = 111 bits (268), Expect = 8e-26
Identities = 56/155 (36%), Positives = 94/155 (60%)
Frame = -1
Query: 735 RRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGYETNL 556
R +L ++ QE + + ++ EN+ D N ++T +I + A++ + I L G + +
Sbjct: 1300 RSRLSIIPQESQIFEGNIRENL---DPNHRLTDKKIWEVLEIASLKNCISQLEDGLYSRV 1356
Query: 555 GANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
GA S GQ+Q +C+AR L+ S R+LLLDEAT+++ A ++ V + + K K RT +T
Sbjct: 1357 AEGGANFSSGQRQLICLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRFKDRTILT 1416
Query: 375 IAHRLSTVKDADLICVIDKGKIVERGTHAELISMK 271
+AHR++TV D+D I V+D GK+VE +L+ K
Sbjct: 1417 VAHRINTVMDSDRILVLDHGKVVEFDATKKLLENK 1451
Score = 73.3 bits (172), Expect = 3e-14
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Frame = -1
Query: 726 LGVVQQEPVLLDRSLAENIAYGDN-NRKVTMHEIVAAAKAANIHSFIVSLPKGYETNLGA 550
L Q+P + D ++ ENI +G + ++ I A + F +G +T +G
Sbjct: 644 LAYAAQQPWIFDATIRENILFGSEFDPELYEKTIHACCLKRDFEIFT----EGDQTEVGQ 699
Query: 549 NGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEAL---EKAAKGRTCI 379
GA LSGGQK R+ +ARA+ + LLD+ S++D R + + L E + +
Sbjct: 700 KGASLSGGQKSRISLARAIYSQADIYLLDDVLSSVDQHVSRDLIKNLFGPEGFLRTHCVV 759
Query: 378 TIAHRLSTVKDADLICVIDKGKIVERGTHAEL 283
+ L+ +K+AD I ++ GKIVE+G + L
Sbjct: 760 LTTNSLNVLKEADSIYILSNGKIVEKGNYEHL 791
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 111 bits (266), Expect = 1e-25
Identities = 59/155 (38%), Positives = 93/155 (60%)
Frame = -1
Query: 735 RRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGYETNL 556
R +L ++ QE + ++ EN+ D N T EI A +AA++ FI +L G + +
Sbjct: 1298 RSRLAIIPQENQAFEGTIRENL---DPNANATDEEIWHALEAASLKQFIQTLDGGLYSRV 1354
Query: 555 GANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
GA LS GQ+Q +C+ RAL+ R+LLLDEAT+A+D ++ V + + RT +T
Sbjct: 1355 TEGGANLSSGQRQLMCLTRALLTPTRVLLLDEATAAVDVETDAIVQRTIRERFNDRTILT 1414
Query: 375 IAHRLSTVKDADLICVIDKGKIVERGTHAELISMK 271
IAHR++TV D++ I V+D GK+VE + +L+ K
Sbjct: 1415 IAHRINTVMDSNRILVLDHGKVVEFDSTKKLLENK 1449
Score = 68.9 bits (161), Expect = 7e-13
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Frame = -1
Query: 711 QEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGYETNLGANGAQLS 532
Q+P +L+ ++ ENI +G + + A + F + L G +T +G G LS
Sbjct: 651 QQPWILNATIQENILFGLELDPEFYEKTIRAC--CLLRDFEI-LADGDQTEVGEKGISLS 707
Query: 531 GGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEAL---EKAAKGRTCITIAHRL 361
GGQK R+ +ARA+ + LLD+ SA+D R + L + + R I + L
Sbjct: 708 GGQKARISLARAVYSRSDIYLLDDILSAVDQHVNRDLVRNLLGSKGLLRSRCVILSTNSL 767
Query: 360 STVKDADLICVIDKGKIVERGTHAELIS 277
+ +K+A +I ++ GKI+E G+ +L S
Sbjct: 768 TVLKEASMIYMLRNGKIIESGSFTQLSS 795
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 107 bits (256), Expect = 2e-24
Identities = 54/184 (29%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Frame = -1
Query: 756 ALTIPRXRRQLGVVQQEPVLLDRSLAENI----AYGDNN-----RKVTMHEIVAAAKAAN 604
+L + R+++ ++ Q+PVL+ ++ N+ YGD + + +V A+ +
Sbjct: 1247 SLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNS 1306
Query: 603 IHSFIVSLPKGYETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERA 424
+ +F + L +T + + G S GQ+Q + +ARAL+R R+++LDE+T+++D +++R
Sbjct: 1307 LDAFAIHL----DTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRR 1362
Query: 423 VTEALEKAAKGRTCITIAHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMCRG 244
+ + L A K T + IAHR+ T+ D D + V+D GK VE G+ L + + +W+MC+
Sbjct: 1363 IQQMLRAAFKHATVLCIAHRIKTIVDYDKVLVLDSGKTVEFGSPKSLYTQRRAFWKMCKE 1422
Query: 243 QNMA 232
+++
Sbjct: 1423 SHIS 1426
Score = 69.7 bits (163), Expect = 4e-13
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Frame = -1
Query: 753 LTIPRXRRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPK 574
+T P +++ V Q L + ++ NI +G+ + +I+ KA + S + S+
Sbjct: 638 MTTPSISQRIAYVPQAAWLRNGTIRSNILFGEPYDEERYFQII---KACCLDSDLNSMND 694
Query: 573 GYETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEA--LEKA 400
G T + +NG+ LSGGQKQRV +ARAL + + + D+ SALD S+ R + E+ L
Sbjct: 695 GDLTYIHSNGSSLSGGQKQRVSLARALYSNAEVYIFDDIFSALDVSTSRKIYESCFLSTL 754
Query: 399 AKGRTCITIAHRLSTVKDADLICVIDKGKIVERGTHAELIS 277
+ +T I H +S L I + IV + + A+L+S
Sbjct: 755 LQHKTIILFTHNVS------LCLPIAENVIVLKNSTAQLVS 789
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 103 bits (248), Expect = 2e-23
Identities = 54/147 (36%), Positives = 88/147 (59%)
Frame = -1
Query: 720 VVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGYETNLGANGA 541
+V Q+PV+ D ++ ENI + N + E V + A + F ++ + Y+T A
Sbjct: 514 LVCQQPVIFDMTIRENIIMRNENASESDFEEVC--RLALVDEFALTFDQSYDTP--CKEA 569
Query: 540 QLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCITIAHRL 361
LSGGQ+QR+ +ARAL+R +L+LDE TSALD ++ V +A+ KG+T + I H +
Sbjct: 570 SLSGGQQQRIALARALLRDTEILILDEPTSALDPITKNLVMDAIRAHRKGKTTLVITHDM 629
Query: 360 STVKDADLICVIDKGKIVERGTHAELI 280
S + + +L+ VIDKG +++R EL+
Sbjct: 630 SQINNDELVLVIDKGHLIQRCARKELV 656
Score = 102 bits (244), Expect = 6e-23
Identities = 58/165 (35%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Frame = -1
Query: 732 RQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGYETNLG 553
+++ +V Q+P LL ++ E++ YG + ++ ++ A + I +LP G +T L
Sbjct: 1174 KKVAIVDQKPHLLGSTILESLLYGVDR---DINSVMDALDKTYMTEVIQNLPNGLDTPLL 1230
Query: 552 ANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCITI 373
SGGQ QR+ ARAL+R+PRLL+LDE TSALD+ S + + ++ + T + I
Sbjct: 1231 EFSKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLS--CTVLII 1288
Query: 372 AHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMC-RGQ 241
H+ S +K AD I V+D G + E G+ EL++ H+W++ RG+
Sbjct: 1289 THQPSLMKLADRIIVMDSGIVKESGSFDELMNRHTHFWKLIHRGE 1333
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 98.3 bits (234), Expect = 1e-21
Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 4/171 (2%)
Frame = -1
Query: 735 RRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIVAAAKAANIHSFIVSLPKGY---- 568
R+++ + Q+P+L ++ N+ D ++E + + A+++ K
Sbjct: 1286 RQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITL 1345
Query: 567 ETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGR 388
+T++ + G+ S GQKQ + +ARA++R ++++LDE T+++D + ++ + + L +A
Sbjct: 1346 DTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLREAFGDA 1405
Query: 387 TCITIAHRLSTVKDADLICVIDKGKIVERGTHAELISMKGHYWRMCRGQNM 235
T + IAHRL T+ D D + V+DKG +VE G A L GH+ RMC G +
Sbjct: 1406 TMLCIAHRLKTIVDYDKVMVLDKGVLVEYGPPAVLYHNNGHFRRMCDGSGI 1456
Score = 54.4 bits (125), Expect = 2e-08
Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Frame = -1
Query: 747 IPRXRRQLGVVQQEPVLLDRSLAENIAYGDNNRKVTMHEIV-AAAKAANIHSFIVSLPKG 571
+PR + + V Q P L + ++ +NI + + +++ A ++ SF+ S
Sbjct: 674 LPRSKG-VSYVSQVPWLRNATIRDNILFDYPYIEERYKKVIQACGLLTDLQSFVAS---- 728
Query: 570 YETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAA-- 397
T +G G LSGGQKQR+ +ARA+ ++L+D+ SALD + + + +++
Sbjct: 729 DLTEIGEKGVTLSGGQKQRIALARAVYSPTSIVLMDDVFSALDIHTSNWIYKHCFQSSLM 788
Query: 396 KGRTCITIAHRLSTVKDADLICVIDK 319
+ RT I + H + D+ V K
Sbjct: 789 ENRTVILVTHNVHLFMDSAAFIVTVK 814
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 46.0 bits (104), Expect = 6e-06
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -1
Query: 540 QLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCITIAHRL 361
+LSGG + R+ +AR L P L++LDE T+ LD + + E L +G T + H
Sbjct: 420 ELSGGWRMRIALARILFIKPTLMMLDEPTNHLDLEAVAWLEEYLTHEMEGHTLLITCHTQ 479
Query: 360 STVKD 346
T+ +
Sbjct: 480 DTLNE 484
Score = 46.0 bits (104), Expect = 6e-06
Identities = 30/79 (37%), Positives = 43/79 (54%)
Frame = -1
Query: 540 QLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCITIAHRL 361
QLS GQ++RV A + P +LLLDE T+ALD + A+ +AL G IT RL
Sbjct: 712 QLSDGQRRRVLFAFLGMTQPHILLLDEPTNALDIDTIDALADALNNFDGGVVFITHDFRL 771
Query: 360 STVKDADLICVIDKGKIVE 304
+ A+ I ++ G + E
Sbjct: 772 ID-QVAEEIWIVQNGTVKE 789
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/59 (40%), Positives = 38/59 (64%)
Frame = -1
Query: 543 AQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCITIAH 367
A LSGG K ++ +ARA+++ +LLLDE T+ LD ++ A EA + K TC+ ++H
Sbjct: 561 ASLSGGWKMKLELARAMLQKADILLLDEPTNHLDVAN-IAWLEAYLTSQKNITCLIVSH 618
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = -1
Query: 543 AQLSGGQKQRVCIARALIRSPRLLLLDEATSALD 442
+ LSGGQK +V IA L +P+LL+LDE T+ LD
Sbjct: 909 SSLSGGQKVKVVIAACLWNNPQLLVLDEPTNFLD 942
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 44.8 bits (101), Expect = 1e-05
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = -1
Query: 537 LSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCITIAH 367
LSGGQK RV A +++P +L+LDE T+ LD S A+T A+++ G I ++H
Sbjct: 637 LSGGQKSRVAFACLGLQNPHILILDEPTNHLDMESMDALTRAVKRFQGG--VILVSH 691
Score = 39.1 bits (87), Expect = 7e-04
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = -1
Query: 534 SGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALE 406
SGG + R+ +ARAL P LLLLDE ++ LD S ++E L+
Sbjct: 356 SGGWRMRLSLARALFCQPDLLLLDEPSNMLDVPSIAFLSEYLQ 398
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 39.1 bits (87), Expect = 7e-04
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = -1
Query: 537 LSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEAL 409
LS GQ +R +A L++ P+LLLLDE + LD +S ++ L
Sbjct: 149 LSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLL 191
Score = 33.5 bits (73), Expect = 0.033
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -1
Query: 543 AQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEAL-EKAAKGRTCITIAH 367
+ +S G ++ + RA+++ PRL++LDE +D L EK + + + I+H
Sbjct: 404 SSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIISH 463
Query: 366 RLSTVKD-ADLICVIDKGKIV 307
+ + ID GK+V
Sbjct: 464 YEDELPACVNRRAHIDNGKLV 484
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 39.1 bits (87), Expect = 7e-04
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = -1
Query: 633 EIVAAAKAANIHSFIVSLPKGYETNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEAT 454
EIV A K + ++++P G LSGG K ++ + RA+ ++P +LLLDE T
Sbjct: 527 EIVKALKENSFTDELINMPIG----------SLSGGWKMKLALTRAMFKNPDILLLDEPT 576
Query: 453 SALD 442
+ LD
Sbjct: 577 NHLD 580
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 537 LSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
LSGGQK ++ +A P +++LDE T+ LD S A+++ L+ G +T
Sbjct: 904 LSGGQKVKLVLAACTWLRPHVIVLDEPTNYLDRDSLGALSKGLKNFGGGVVLVT 957
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 38.7 bits (86), Expect = 9e-04
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -1
Query: 537 LSGGQKQRVCIARALIRSPRLLLLDEATSALD 442
+SGG + RV ++RAL P LLLLDE T+ LD
Sbjct: 221 MSGGWRMRVALSRALFIKPSLLLLDEPTNHLD 252
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 29.9 bits (64), Expect = 0.41
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -1
Query: 543 AQLSGGQKQRVCIARAL----IRSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
A+LSGGQ+ V +A + + + +LDE +ALD S + + ++ KG I
Sbjct: 1084 AELSGGQRSLVALALIMSLLKYKPAPMYILDEIDAALDLSHTQNIGRLIKTKFKGSQFII 1143
Query: 375 IA 370
++
Sbjct: 1144 VS 1145
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 29.9 bits (64), Expect = 0.41
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 537 LSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEK 403
LSGG+ QRV I AL + L+DE ++ LD+ ++ + +
Sbjct: 456 LSGGELQRVAICLALGMPADVYLIDEPSAYLDSEQRIIASKVIRR 500
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 29.1 bits (62), Expect = 0.72
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Frame = -1
Query: 540 QLSGGQKQRVCIARALIRSPR-----LLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
QLSGGQK +C + R +LDE + LDA A+ +++ +K I
Sbjct: 1096 QLSGGQKS-LCALTLIFAIQRCDPAPFNILDECDANLDAQYRSAIAAMVKEMSKTSQFIC 1154
Query: 375 IAHRLSTVKDAD 340
R VK AD
Sbjct: 1155 TTFRPEMVKVAD 1166
>SPBC18E5.03c |sim4||kinetochore protein Sim4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 277
Score = 28.3 bits (60), Expect = 1.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 111 LKKSLHGTKIFLIILKYEYLKIGKQKQENTSIKGIMGK 224
LKK+LH K +LK E +I K + S+K MG+
Sbjct: 101 LKKNLHSNKKLEAVLKEELHQIKKFSSDLQSLKSSMGE 138
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 27.9 bits (59), Expect = 1.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 564 TNLGANGAQLSGGQKQRVCIARALIRSPRLLLLDEATSALDASSERAVTEALEKAAKGRT 385
+NL + G R+CI + RS E + LD E + + ALEK K +
Sbjct: 389 SNLSNARVAILEGYSNRLCIWDRIERSKT----GEMNNVLDEKEEISASSALEKLIKNNS 444
Query: 384 CI 379
C+
Sbjct: 445 CL 446
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 25.4 bits (53), Expect = 8.8
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -2
Query: 230 NYFSHNAFYTRVFL-FLFSYFEILIF*DYKKYF 135
N +HN FY VFL +LF F I I +Y+
Sbjct: 132 NVKNHNRFYAHVFLSWLFFGFTIFIIYRELRYY 164
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,891,966
Number of Sequences: 5004
Number of extensions: 58004
Number of successful extensions: 188
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 361294920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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