Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_D03
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    58   2e-10
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    58   2e-10
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    58   2e-10
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    29   0.12 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.9  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   4.4  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   4.4  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   5.8  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 58.4 bits (135), Expect = 2e-10
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = -1

Query: 633 EIVAAAKAANIHSFI--VSLPKGYETNLGANGA--QLSGGQKQRVCIARALIRSPRLLLL 466
           ++ A+ K   +   +  +SL K  +T +GA G    LSGG+++R+  A   +  P LLL 
Sbjct: 208 DVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLC 267

Query: 465 DEATSALDASSERAVTEALE-KAAKGRTCITIAHRLSTVKDADLICVIDKGKIVERGTHA 289
           DE TS LD+    +V + L+  A KG+T I   H+ S    ++L C+ DK  +V  G  A
Sbjct: 268 DEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPS----SELYCLFDKILLVAEGRVA 323

Query: 288 EL 283
            L
Sbjct: 324 FL 325


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 58.4 bits (135), Expect = 2e-10
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = -1

Query: 633 EIVAAAKAANIHSFI--VSLPKGYETNLGANGA--QLSGGQKQRVCIARALIRSPRLLLL 466
           ++ A+ K   +   +  +SL K  +T +GA G    LSGG+++R+  A   +  P LLL 
Sbjct: 208 DVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLC 267

Query: 465 DEATSALDASSERAVTEALE-KAAKGRTCITIAHRLSTVKDADLICVIDKGKIVERGTHA 289
           DE TS LD+    +V + L+  A KG+T I   H+ S    ++L C+ DK  +V  G  A
Sbjct: 268 DEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPS----SELYCLFDKILLVAEGRVA 323

Query: 288 EL 283
            L
Sbjct: 324 FL 325


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 58.4 bits (135), Expect = 2e-10
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)
 Frame = -1

Query: 633 EIVAAAKAANIHSFI--VSLPKGYETNLGANGA--QLSGGQKQRVCIARALIRSPRLLLL 466
           ++ A+ K   +   +  +SL K  +T +GA G    LSGG+++R+  A   +  P LLL 
Sbjct: 186 DVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLC 245

Query: 465 DEATSALDASSERAVTEALE-KAAKGRTCITIAHRLSTVKDADLICVIDKGKIVERGTHA 289
           DE TS LD+    +V + L+  A KG+T I   H+ S    ++L C+ DK  +V  G  A
Sbjct: 246 DEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPS----SELYCLFDKILLVAEGRVA 301

Query: 288 EL 283
            L
Sbjct: 302 FL 303


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = -1

Query: 540  QLSGGQKQRVCIAR--ALIR-SPR-LLLLDEATSALDASSERAVTEALEKAAKGRTCITI 373
            QLSGGQK  V +A   A+ +  P    L DE   ALDA    AV + + + +     IT 
Sbjct: 1098 QLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRSAVADMIHEQSDRAQFITT 1157

Query: 372  AHRLSTVKDA 343
              R   ++ A
Sbjct: 1158 TFRPELMEKA 1167


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
 Frame = -1

Query: 543  AQLSGGQKQRVCIARALI----RSPRLLLLDEATSALDASSERAVTEALEKAAKGRTCIT 376
            + LSGG+K    +A        +   L ++DE  +ALD  +   V   +++  K    I 
Sbjct: 1185 SNLSGGEKTLSSLALVFALHYYKPSPLYVMDEIDAALDFKNVSIVAHYIKERTKNAQFII 1244

Query: 375  IAHRLSTVKDADLICVIDKGK 313
            I+ R +  + +D +  I K K
Sbjct: 1245 ISLRSNMFELSDYLVGIYKVK 1265


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = -1

Query: 480 RLLLLDEATSALDASSERAVTEALEKAAKGRTCITIAHRLSTVKDADLICVIDK 319
           RL  LDEA S L+ + ERA  EA +  A+    I+++   +  +  + + V DK
Sbjct: 462 RLGNLDEAMSKLEQAIERAKIEA-QHDAQYYDSISVSMTYNLARLYEAMAVFDK 514


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 150  ILKYEYLKIGKQKQENTSIKGIMGKIIKPYFGLY 251
            + KY Y   G+  ++   I+ + GK +  Y G+Y
Sbjct: 2515 LYKYVYDSAGRLSRKKYYIRDVQGKPLIEYEGIY 2548


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 150  ILKYEYLKIGKQKQENTSIKGIMGKIIKPYFGLY 251
            + KY Y   G+  ++   I+ + GK +  Y G+Y
Sbjct: 2516 LYKYVYDSAGRLSRKKYYIRDVQGKPLIEYEGIY 2549


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = -1

Query: 480 RLLLLDEATSALDASSERAVTEALEKAAKGRTCITIA--HRLSTVKDADLICVIDKGKIV 307
           R  L+D   S+   S + A T  +E++ +    +     +R+  V D  + C ++ G+I+
Sbjct: 140 RSWLIDSGASSHLCSDKSAFT-VMEQSLRSNVTVADGSENRVEGVGDCLIKCAVENGEII 198

Query: 306 E 304
           E
Sbjct: 199 E 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,634
Number of Sequences: 2352
Number of extensions: 15232
Number of successful extensions: 33
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)