Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C18
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...   333   1e-91
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...   333   1e-91
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   8.2  
AF241649-1|AAF44704.1|  366|Drosophila melanogaster titin protein.     29   8.2  
AF135167-1|AAF62351.1|  366|Drosophila melanogaster titin protein.     29   8.2  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   8.2  

>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score =  333 bits (819), Expect = 1e-91
 Identities = 156/219 (71%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
 Frame = -1

Query: 712 YQXDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCF 533
           YQ DQINKQ EQMYHLLAICLVLHPQC+DESIQQVLREKNYH+ MFKMQ GDL  F+S F
Sbjct: 326 YQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFF 385

Query: 532 TFACPKFLSACPPPIE-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMA 356
            FACP+F+S CPP ++ P  +Y +D ++HQ QVFMDEVRQQK LPT RSYLKLYTTLP+ 
Sbjct: 386 VFACPRFVSPCPPAVDAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLT 445

Query: 355 KLAAFMSAARGSERDAAREHAALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYI 176
           KLA+F+     SE D ++    L I LLCFKHKM+N+VW+KGPSGL+G F+SGSELDFYI
Sbjct: 446 KLASFIDP-NASEDDVSK----LLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYI 500

Query: 175 DNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 59
           D+DMIHIADTKV+HRYGDFF+RK+LKF +LNRKL +I I
Sbjct: 501 DDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score =  333 bits (819), Expect = 1e-91
 Identities = 156/219 (71%), Positives = 183/219 (83%), Gaps = 1/219 (0%)
 Frame = -1

Query: 712 YQXDQINKQTEQMYHLLAICLVLHPQCVDESIQQVLREKNYHEKMFKMQYGDLGEFESCF 533
           YQ DQINKQ EQMYHLLAICLVLHPQC+DESIQQVLREKNYH+ MFKMQ GDL  F+S F
Sbjct: 326 YQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLEVFKSFF 385

Query: 532 TFACPKFLSACPPPIE-PGANYGRDAVKHQTQVFMDEVRQQKMLPTIRSYLKLYTTLPMA 356
            FACP+F+S CPP ++ P  +Y +D ++HQ QVFMDEVRQQK LPT RSYLKLYTTLP+ 
Sbjct: 386 VFACPRFVSPCPPAVDAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSYLKLYTTLPLT 445

Query: 355 KLAAFMSAARGSERDAAREHAALAIHLLCFKHKMKNVVWTKGPSGLDGKFQSGSELDFYI 176
           KLA+F+     SE D ++    L I LLCFKHKM+N+VW+KGPSGL+G F+SGSELDFYI
Sbjct: 446 KLASFIDP-NASEDDVSK----LLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYI 500

Query: 175 DNDMIHIADTKVAHRYGDFFIRKLLKFEELNRKLHHIKI 59
           D+DMIHIADTKV+HRYGDFF+RK+LKF +LNRKL +I I
Sbjct: 501 DDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNINI 539


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 236  SPNYVLHFVLEAEQVNGESRMLTCRVT 316
            SP +V   V   E ++GE+ +LTC+VT
Sbjct: 6941 SPRFVEELVQPVEVMDGEALLLTCQVT 6967


>AF241649-1|AAF44704.1|  366|Drosophila melanogaster titin protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 236 SPNYVLHFVLEAEQVNGESRMLTCRVT 316
           SP +V   V   E ++GE+ +LTC+VT
Sbjct: 307 SPRFVEELVQPVEVMDGEALLLTCQVT 333


>AF135167-1|AAF62351.1|  366|Drosophila melanogaster titin protein.
          Length = 366

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 236 SPNYVLHFVLEAEQVNGESRMLTCRVT 316
           SP +V   V   E ++GE+ +LTC+VT
Sbjct: 307 SPRFVEELVQPVEVMDGEALLLTCQVT 333


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
            isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +2

Query: 236  SPNYVLHFVLEAEQVNGESRMLTCRVT 316
            SP +V   V   E ++GE+ +LTC+VT
Sbjct: 6941 SPRFVEELVQPVEVMDGEALLLTCQVT 6967


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,497,826
Number of Sequences: 53049
Number of extensions: 810920
Number of successful extensions: 1884
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1878
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)