Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_C12
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC146779-1|AAI46780.1| 1669|Homo sapiens intersectin 2 protein. 30 9.4
BC064989-1|AAH64989.1| 423|Homo sapiens family with sequence si... 30 9.4
BC039689-1|AAH39689.1| 423|Homo sapiens family with sequence si... 30 9.4
AK074503-1|BAC11027.1| 423|Homo sapiens protein ( Homo sapiens ... 30 9.4
AF248540-1|AAF63600.1| 1681|Homo sapiens intersectin 2 protein. 30 9.4
AF182199-1|AAF59904.1| 1248|Homo sapiens intersectin 2 short iso... 30 9.4
AF182198-1|AAF59903.1| 1696|Homo sapiens intersectin 2 long isof... 30 9.4
AC009228-1|AAX93122.1| 1329|Homo sapiens unknown protein. 30 9.4
AB209899-1|BAD93136.1| 967|Homo sapiens Hypothetical protein DK... 30 9.4
AB033082-1|BAA86570.1| 1676|Homo sapiens KIAA1256 protein protein. 30 9.4
>BC146779-1|AAI46780.1| 1669|Homo sapiens intersectin 2 protein.
Length = 1669
Score = 30.3 bits (65), Expect = 9.4
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = -3
Query: 571 NFWKMSYIKVKQEESST----QTQE-IKNAPRKA--KLRQDVKVLKQKLKSREI--VIVN 419
N WK + K ++E+ +TQE I+ RKA K R+D LK + K RE V+VN
Sbjct: 674 NLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKDTLKAEEKKRETASVLVN 733
Query: 418 IKSILDLLKKNGD 380
+++ +N D
Sbjct: 734 YRALYPFEARNHD 746
>BC064989-1|AAH64989.1| 423|Homo sapiens family with sequence
similarity 43, member A protein.
Length = 423
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -1
Query: 318 LTKINYLFR*KKKNLHKIGEMLYYLFILLGSQYTSQAKDT*KTQIKRNNSW 166
L+++ +FR K+K LH E Y + LG+ T QA+ T + W
Sbjct: 47 LSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIW 97
>BC039689-1|AAH39689.1| 423|Homo sapiens family with sequence
similarity 43, member A protein.
Length = 423
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -1
Query: 318 LTKINYLFR*KKKNLHKIGEMLYYLFILLGSQYTSQAKDT*KTQIKRNNSW 166
L+++ +FR K+K LH E Y + LG+ T QA+ T + W
Sbjct: 47 LSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIW 97
>AK074503-1|BAC11027.1| 423|Homo sapiens protein ( Homo sapiens
cDNA FLJ90022 fis, clone HEMBA1000907. ).
Length = 423
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -1
Query: 318 LTKINYLFR*KKKNLHKIGEMLYYLFILLGSQYTSQAKDT*KTQIKRNNSW 166
L+++ +FR K+K LH E Y + LG+ T QA+ T + W
Sbjct: 47 LSRVGSMFRSKRKKLHITSEDPTYTVLYLGNATTIQARGDGCTDLAVGKIW 97
>AF248540-1|AAF63600.1| 1681|Homo sapiens intersectin 2 protein.
Length = 1681
Score = 30.3 bits (65), Expect = 9.4
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = -3
Query: 571 NFWKMSYIKVKQEESST----QTQE-IKNAPRKA--KLRQDVKVLKQKLKSREI--VIVN 419
N WK + K ++E+ +TQE I+ RKA K R+D LK + K RE V+VN
Sbjct: 686 NLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKDTLKAEEKKRETASVLVN 745
Query: 418 IKSILDLLKKNGD 380
+++ +N D
Sbjct: 746 YRALYPFEARNHD 758
>AF182199-1|AAF59904.1| 1248|Homo sapiens intersectin 2 short
isoform protein.
Length = 1248
Score = 30.3 bits (65), Expect = 9.4
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = -3
Query: 571 NFWKMSYIKVKQEESST----QTQE-IKNAPRKA--KLRQDVKVLKQKLKSREI--VIVN 419
N WK + K ++E+ +TQE I+ RKA K R+D LK + K RE V+VN
Sbjct: 701 NLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKDTLKAEEKKRETASVLVN 760
Query: 418 IKSILDLLKKNGD 380
+++ +N D
Sbjct: 761 YRALYPFEARNHD 773
>AF182198-1|AAF59903.1| 1696|Homo sapiens intersectin 2 long isoform
protein.
Length = 1696
Score = 30.3 bits (65), Expect = 9.4
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = -3
Query: 571 NFWKMSYIKVKQEESST----QTQE-IKNAPRKA--KLRQDVKVLKQKLKSREI--VIVN 419
N WK + K ++E+ +TQE I+ RKA K R+D LK + K RE V+VN
Sbjct: 701 NLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKDTLKAEEKKRETASVLVN 760
Query: 418 IKSILDLLKKNGD 380
+++ +N D
Sbjct: 761 YRALYPFEARNHD 773
>AC009228-1|AAX93122.1| 1329|Homo sapiens unknown protein.
Length = 1329
Score = 30.3 bits (65), Expect = 9.4
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = -3
Query: 571 NFWKMSYIKVKQEESST----QTQE-IKNAPRKA--KLRQDVKVLKQKLKSREI--VIVN 419
N WK + K ++E+ +TQE I+ RKA K R+D LK + K RE V+VN
Sbjct: 701 NLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKDTLKAEEKKRETASVLVN 760
Query: 418 IKSILDLLKKNGD 380
+++ +N D
Sbjct: 761 YRALYPFEARNHD 773
>AB209899-1|BAD93136.1| 967|Homo sapiens Hypothetical protein
DKFZp434O1826 variant protein.
Length = 967
Score = 30.3 bits (65), Expect = 9.4
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = -3
Query: 799 YSLWLVFFRKS*KFPCNHGEHLYCKWF*ARILSSLWNILPYIRFIDKFLLVVARKHVYHL 620
Y+LW + + + +++C + RILS W+ I + L+ V+ HL
Sbjct: 701 YNLWTAYQNEETQQVLMEERNVFCGTYNVRILSDTWDQNRVIHYSGGDLIAVSSNRKIHL 760
Query: 619 PDVKRTRRI 593
D+ + + I
Sbjct: 761 LDIIQVKAI 769
>AB033082-1|BAA86570.1| 1676|Homo sapiens KIAA1256 protein protein.
Length = 1676
Score = 30.3 bits (65), Expect = 9.4
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Frame = -3
Query: 571 NFWKMSYIKVKQEESST----QTQE-IKNAPRKA--KLRQDVKVLKQKLKSREI--VIVN 419
N WK + K ++E+ +TQE I+ RKA K R+D LK + K RE V+VN
Sbjct: 681 NLWKENLRKEEEEKQKRLQEEKTQEKIQEEERKAEEKQRKDKDTLKAEEKKRETASVLVN 740
Query: 418 IKSILDLLKKNGD 380
+++ +N D
Sbjct: 741 YRALYPFEARNHD 753
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,048,312
Number of Sequences: 237096
Number of extensions: 2130990
Number of successful extensions: 3926
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3924
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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