Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C11
         (350 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L12146-1|AAB02614.1|  529|Homo sapiens protein phosphatase 2A 72...    29   5.5  
L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 13...    29   5.5  
BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2 (...    29   5.5  
AL389975-1|CAB97532.1|  383|Homo sapiens protein phosphatase 2A ...    29   5.5  

>L12146-1|AAB02614.1|  529|Homo sapiens protein phosphatase 2A 72
           kDa regulatory subunit protein.
          Length = 529

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 177 FFRYINFKLVYCKVHALSLSH-VYLSSVDMXLF 82
           +F Y +F ++YCK   L   H +Y+S  D+  +
Sbjct: 273 YFSYEHFYVIYCKFWELDTDHDLYISQADLSRY 305


>L07590-1|AAB02613.1| 1150|Homo sapiens protein phosphatase 2A 130
           kDa regulatory subunit protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 177 FFRYINFKLVYCKVHALSLSH-VYLSSVDMXLF 82
           +F Y +F ++YCK   L   H +Y+S  D+  +
Sbjct: 894 YFSYEHFYVIYCKFWELDTDHDLYISQADLSRY 926


>BC065531-1|AAH65531.1| 1150|Homo sapiens protein phosphatase 2
           (formerly 2A), regulatory subunit B'', alpha protein.
          Length = 1150

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 177 FFRYINFKLVYCKVHALSLSH-VYLSSVDMXLF 82
           +F Y +F ++YCK   L   H +Y+S  D+  +
Sbjct: 894 YFSYEHFYVIYCKFWELDTDHDLYISQADLSRY 926


>AL389975-1|CAB97532.1|  383|Homo sapiens protein phosphatase 2A 72
           kDa regulatory subunit protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 177 FFRYINFKLVYCKVHALSLSH-VYLSSVDMXLF 82
           +F Y +F ++YCK   L   H +Y+S  D+  +
Sbjct: 127 YFSYEHFYVIYCKFWELDTDHDLYISQADLSRY 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,986,971
Number of Sequences: 237096
Number of extensions: 507695
Number of successful extensions: 640
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)