Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C07
         (747 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0009 + 68825-68950,72571-72669,72841-72929,74971-75087,757...    28   6.9  
12_01_0610 + 5030130-5030247,5030957-5033193                           28   9.1  

>08_01_0009 +
           68825-68950,72571-72669,72841-72929,74971-75087,
           75747-75906,76419-76549,76810-76906,77584-77877
          Length = 370

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 45  ASLQTPRATFXFPLIFXCCHLQTSNVN 125
           ASLQT R T+ F + F  CH  +  VN
Sbjct: 130 ASLQTFRCTYNFEISFSLCHYGSLMVN 156


>12_01_0610 + 5030130-5030247,5030957-5033193
          Length = 784

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -3

Query: 733 ASYFKGAKLFDRXTHQGNIFLFR*EGRRL*CARVCHSVALQ 611
           + YF GAKL D  T    + L    GR + C +V H   L+
Sbjct: 637 SKYFTGAKLEDSITVGRRVQLVGNAGRMVGCGQVAHGGGLE 677


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,045,445
Number of Sequences: 37544
Number of extensions: 240290
Number of successful extensions: 330
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 329
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 330
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)