Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_C06
(776 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000198-1|AAH00198.1| 86|Homo sapiens splicing factor 3b, sub... 138 2e-32
AL031390-2|CAI19755.1| 86|Homo sapiens splicing factor 3b, sub... 138 2e-32
DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated c... 31 4.6
DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated c... 31 4.6
DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated c... 31 4.6
DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated c... 31 4.6
AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel, voltag... 31 4.6
AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated c... 31 4.6
AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated c... 31 4.6
AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel ... 31 4.6
AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-typ... 31 4.6
AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel, voltag... 31 6.1
AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel, voltag... 31 6.1
AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel, voltag... 31 6.1
AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calci... 31 6.1
AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel ... 31 6.1
AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha... 31 6.1
AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel ... 31 6.1
AB032946-1|BAA86434.1| 1024|Homo sapiens KIAA1120 protein protein. 31 6.1
>BC000198-1|AAH00198.1| 86|Homo sapiens splicing factor 3b,
subunit 5, 10kDa protein.
Length = 86
Score = 138 bits (334), Expect = 2e-32
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = -3
Query: 774 QSKYIGTGHADXTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQ 595
QSKYIGTGHAD TK+EWL+NQHRDS CSYMGH DLL+YFAI ENESKARV+FNLME+MLQ
Sbjct: 15 QSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQ 74
Query: 594 PCGPPPEKPED 562
PCGPP +KPE+
Sbjct: 75 PCGPPADKPEE 85
>AL031390-2|CAI19755.1| 86|Homo sapiens splicing factor 3b,
subunit 5, 10kDa protein.
Length = 86
Score = 138 bits (334), Expect = 2e-32
Identities = 59/71 (83%), Positives = 66/71 (92%)
Frame = -3
Query: 774 QSKYIGTGHADXTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQ 595
QSKYIGTGHAD TK+EWL+NQHRDS CSYMGH DLL+YFAI ENESKARV+FNLME+MLQ
Sbjct: 15 QSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQ 74
Query: 594 PCGPPPEKPED 562
PCGPP +KPE+
Sbjct: 75 PCGPPADKPEE 85
>DQ363529-1|ABC88012.1| 1099|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 577
protein.
Length = 1099
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 368 FITFIICVNVITMSMEHYNQPKSL 391
>DQ363528-1|ABC88011.1| 1083|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 544
protein.
Length = 1083
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 363 FITFIICVNVITMSMEHYNQPKSL 386
>DQ363527-1|ABC88010.1| 1088|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 513
protein.
Length = 1088
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 357 FITFIICVNVITMSMEHYNQPKSL 380
>DQ363526-1|ABC88009.1| 1077|Homo sapiens low-voltage-activated
calcium channel alpha1H subunit splice variant 512
protein.
Length = 1077
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 357 FITFIICVNVITMSMEHYNQPKSL 380
>AJ420779-1|CAD12646.1| 2347|Homo sapiens calcium channel,
voltage-dependent, T type, alphant regulator of
chromatin, sub protein.
Length = 2347
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1616 FITFIICVNVITMSMEHYNQPKSL 1639
>AF223563-1|AAF60163.1| 1536|Homo sapiens low-voltage-activated
calcium channel alpha13.2 subunit delta25B splice
variant protein.
Length = 1536
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 805 FITFIICVNVITMSMEHYNQPKSL 828
>AF073931-1|AAD17668.1| 2353|Homo sapiens low-voltage activated
calcium channel alpha 1H protein.
Length = 2353
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1622 FITFIICVNVITMSMEHYNQPKSL 1645
>AF051946-1|AAC67239.3| 2353|Homo sapiens T-type calcium channel alpha
1H subunit protein.
Length = 2353
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1622 FITFIICVNVITMSMEHYNQPKSL 1645
>AE006466-3|AAK61268.1| 2373|Homo sapiens voltage dependent t-type
calcium channel alpha-1H subunit protein.
Length = 2373
Score = 31.1 bits (67), Expect = 4.6
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1642 FITFIICVNVITMSMEHYNQPKSL 1665
>AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1492 FITFIICLNVVTMSLEHYNQPTSL 1515
>AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1492 FITFIICLNVVTMSLEHYNQPTSL 1515
>AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1492 FITFIICLNVVTMSLEHYNQPTSL 1515
>AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calcium
channel T-type alpha 1I subunit protein.
Length = 2188
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1457 FITFIICLNVVTMSLEHYNQPTSL 1480
>AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel
alpha1 subunit Alpha1I-a isoform protein.
Length = 1981
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1457 FITFIICLNVVTMSLEHYNQPTSL 1480
>AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha1I
subunit, delta36B splice variant protein.
Length = 2223
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1492 FITFIICLNVVTMSLEHYNQPTSL 1515
>AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel
alpha1I subunit protein.
Length = 2016
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 1492 FITFIICLNVVTMSLEHYNQPTSL 1515
>AB032946-1|BAA86434.1| 1024|Homo sapiens KIAA1120 protein protein.
Length = 1024
Score = 30.7 bits (66), Expect = 6.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 145 FLTFLLCINVKLLNSLHYREPPKL 74
F+TF++C+NV ++ HY +P L
Sbjct: 293 FITFIICLNVVTMSLEHYNQPTSL 316
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,538,388
Number of Sequences: 237096
Number of extensions: 1928230
Number of successful extensions: 6572
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6572
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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