Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C05
         (754 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          33   0.83 
AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein pr...    31   4.5  
AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...    31   4.5  
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...    31   4.5  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    31   4.5  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                31   4.5  
AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.     31   4.5  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    30   7.8  

>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 33.5 bits (73), Expect = 0.83
 Identities = 17/29 (58%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +3

Query: 672 PP*PP*--PS*P*PPXP*LSYPPP*PP*P 752
           PP PP   P  P PP P  SYPPP PP P
Sbjct: 76  PPPPPQQPPPPPPPPSPGASYPPPQPPPP 104


>AL834396-1|CAD39058.1| 1009|Homo sapiens hypothetical protein
           protein.
          Length = 1009

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 672 PP*PP*PS*P*PPXP*LSYPPP*PP*P 752
           PP PP P  P PP P    PPP PP P
Sbjct: 466 PPMPPPPPPPPPPPPPPPPPPPPPPLP 492


>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 672 PP*PP*PS*P*PPXP*LSYPPP*PP*P 752
           PP PP P  P PP P    PPP PP P
Sbjct: 919 PPPPPPPPPPPPPPPPPPPPPPPPPPP 945


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
           frame 45 protein.
          Length = 1137

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 672 PP*PP*PS*P*PPXP*LSYPPP*PP*P 752
           PP PP P  P PP P    PPP PP P
Sbjct: 919 PPPPPPPPPPPPPPPPPPPPPPPPPPP 945


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +3

Query: 648 LGYPE*S*PP*PP*PS*P*PPXP*LSYPPP*PP 746
           LG P  S P   P P+ P PP P +  PPP PP
Sbjct: 434 LGSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPP 466


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +3

Query: 648 LGYPE*S*PP*PP*PS*P*PPXP*LSYPPP*PP 746
           LG P  S P   P P+ P PP P +  PPP PP
Sbjct: 305 LGSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPP 337


>AB067489-1|BAB67795.1| 1112|Homo sapiens KIAA1902 protein protein.
          Length = 1112

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 15/27 (55%), Positives = 15/27 (55%)
 Frame = +3

Query: 672 PP*PP*PS*P*PPXP*LSYPPP*PP*P 752
           PP PP P  P PP P    PPP PP P
Sbjct: 569 PPMPPPPPPPPPPPPPPPPPPPPPPLP 595


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 15/27 (55%), Positives = 16/27 (59%)
 Frame = +3

Query: 672 PP*PP*PS*P*PPXP*LSYPPP*PP*P 752
           PP PP P+ P PP P    PPP PP P
Sbjct: 350 PPPPPLPNSPAPPNP--GGPPPAPPPP 374


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,646,361
Number of Sequences: 237096
Number of extensions: 1186168
Number of successful extensions: 3264
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3012
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)