Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C04
         (606 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5EGE0 Cluster: Putative metal-inducible metallothionei...    34   3.0  
UniRef50_A5BJQ2 Cluster: Putative uncharacterized protein; n=2; ...    33   6.9  

>UniRef50_Q5EGE0 Cluster: Putative metal-inducible metallothionein;
           n=1; Tetrahymena thermophila|Rep: Putative
           metal-inducible metallothionein - Tetrahymena
           thermophila
          Length = 99

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +1

Query: 220 KLKQEHSRKCCRVQKRWFIIASQPQSPLSSE---FIITFDSSCVTLCCKCVKKQ 372
           K+  E ++ C + +++W    S+ Q+  +S+     +     C+ +CCKC K Q
Sbjct: 3   KISGESTKICSKTEEKWCCCPSETQNCCNSDDKQCCVGSGEGCIYVCCKCCKVQ 56


>UniRef50_A5BJQ2 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 634

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +1

Query: 262 KRWFIIASQPQSPLSSEFIITFDSSCVTLCCK 357
           ++WF+   Q    +S+E  I ++ SC TLC K
Sbjct: 510 QKWFVTRQQQAMSISTELTIFYNISCYTLCSK 541


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,398,875
Number of Sequences: 1657284
Number of extensions: 10169458
Number of successful extensions: 26646
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26636
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43147568152
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)