Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C04
         (606 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   1.1  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   3.5  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   4.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.1  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -2

Query: 593 SYRIGRIYICLICKVGATRGCGFLFAS-ARSTLETLDC--LFFFLIHVIRYILFL 438
           S++  R+   L   +G     GF     A   L+ L+   LFFFL  V+  +LFL
Sbjct: 49  SWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLFL 103


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
 Frame = -2

Query: 593 SYRIGRIYICLICKVGATRGCGFLFAS-ARSTLETLDC--LFFFLIHVIRYILFL 438
           S++  R+   L   +G     GF     A   L+ L+   LFFFL  V+  +LFL
Sbjct: 49  SWKSARVVYALFTLLGTFLISGFQMQKIATKGLDLLEANRLFFFLTGVMASLLFL 103



 Score = 21.4 bits (43), Expect = 6.1
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +1

Query: 217 KKLKQEHSRKCCRVQK 264
           KKL+++++R+C  V+K
Sbjct: 265 KKLREDYTRQCRLVRK 280


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 371 CFLTHLQHRVTHDESNVI 318
           C++T+    + H ESN+I
Sbjct: 147 CYVTYAWSPIDHTESNII 164


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = +1

Query: 460 TCIKKKNRQSRVSRVERADANRKPQPRVAPTLHIKQIY 573
           TC KK++ +S  +   + D  + P+      +H+ Q Y
Sbjct: 243 TCNKKQHLESPSALQAKVDPLKIPEAEKRKLIHLLQEY 280


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/34 (26%), Positives = 15/34 (44%)
 Frame = +1

Query: 274 IIASQPQSPLSSEFIITFDSSCVTLCCKCVKKQQ 375
           ++  +P +P   E       +  T C KC  KQ+
Sbjct: 49  LLEKKPCTPDGEELKRVLPDALKTSCAKCTDKQK 82


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 278 MMNHLFCTRQHFRLCSCFSFLLYFYYIFPLK*N 180
           M+N+ FC +Q  R+   F  ++   ++  +  N
Sbjct: 277 MINYAFCVQQLLRITVAFISIVTALFLVAINFN 309


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = -2

Query: 377  DCCFLTHLQHRVTHDESNVIMNSDDSGDC 291
            D C+ T  +  +  +ES  +++  D+ DC
Sbjct: 1377 DACYSTIEEKNLQVNESGKLIHKIDAQDC 1405


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = -2

Query: 278 MMNHLFCTRQHFRLCSCFSFLLYFYYIFPLK*N 180
           M+N+ FC +Q  R+   F  ++   ++  +  N
Sbjct: 277 MINYAFCVQQLLRITVAFISIVTALFLVAINFN 309


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,628
Number of Sequences: 336
Number of extensions: 3288
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)