Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_C04
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061334-1|AAL28882.1|  341|Drosophila melanogaster LD25880p pro...    30   2.8  
AE014297-1275|AAF54620.2|  341|Drosophila melanogaster CG31441-P...    30   2.8  

>AY061334-1|AAL28882.1|  341|Drosophila melanogaster LD25880p
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/68 (19%), Positives = 30/68 (44%)
 Frame = +1

Query: 307 SEFIITFDSSCVTLCCKCVKKQQSNFLQYNNYC*NTHHIAKCVRRNKIYRITCIKKKNRQ 486
           ++  + FD++   L C+C K Q    L + N C   H       R  + +   + ++  +
Sbjct: 41  TDMYLEFDTTLPHLICQCCKVQLDRILTFRNKCLEVHKSFMAANRKLLRKKAIVDEELDK 100

Query: 487 SRVSRVER 510
             V ++++
Sbjct: 101 PDVEKLQQ 108


>AE014297-1275|AAF54620.2|  341|Drosophila melanogaster CG31441-PA
           protein.
          Length = 341

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/68 (19%), Positives = 30/68 (44%)
 Frame = +1

Query: 307 SEFIITFDSSCVTLCCKCVKKQQSNFLQYNNYC*NTHHIAKCVRRNKIYRITCIKKKNRQ 486
           ++  + FD++   L C+C K Q    L + N C   H       R  + +   + ++  +
Sbjct: 41  TDMYLEFDTTLPHLICQCCKVQLDRILTFRNKCLEVHKSFMAANRKLLRKKAIVDEELDK 100

Query: 487 SRVSRVER 510
             V ++++
Sbjct: 101 PDVEKLQQ 108


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,143,827
Number of Sequences: 53049
Number of extensions: 485903
Number of successful extensions: 1322
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1322
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)