Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_B18
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 139 2e-33
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 50 2e-06
M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein. 29 4.5
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 29 4.5
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 28 5.9
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 28 5.9
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 28 5.9
AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical ... 28 5.9
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 28 7.8
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 28 7.8
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 28 7.8
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 28 7.8
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 28 7.8
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 28 7.8
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 28 7.8
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 28 7.8
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 139 bits (337), Expect = 2e-33
Identities = 69/128 (53%), Positives = 84/128 (65%), Gaps = 1/128 (0%)
Frame = -3
Query: 718 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPL-PGVGDHATVLTQLETSA 542
YDS F A G YK CFSNEFSTFSHK+VYM+ G + L V A +TQLE A
Sbjct: 76 YDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHAAVTQGAHAMTQLENYA 135
Query: 541 EEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNF 362
I L I D+QTHHRLREA GRKRAE+LNE+V WS+G++ +V + QV +LK+F
Sbjct: 136 VAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIGIGQVFLLKSF 195
Query: 361 FSDKPTLY 338
F+DK T Y
Sbjct: 196 FNDKRTRY 203
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 53.2 bits (122), Expect = 2e-07
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Frame = -3
Query: 712 SHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVG------PEQPLPGV----GDHATVL 563
SH+ GDY+VCF N FS S K+V+ E+ + E L + D + +
Sbjct: 84 SHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAHGNLDEADLSAMARTDSDLSAKM 143
Query: 562 TQLETSAEEIH-------SALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAI 404
+L + +E H + LN++ HQ R EA+ R ++V +WS+ TL +
Sbjct: 144 NELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMSANFDRVTFWSVVHTLVM 203
Query: 403 VCVAFTQVMILKNFFSD 353
V VA QV ++++ F +
Sbjct: 204 VGVAGVQVFMIRSLFEE 220
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -3
Query: 703 FTALASGDYKVC-FSNEFSTFS--HKLVYMELNVGPEQPLPGVGDHATVLTQLETSAEEI 533
FT+ G++ +C +SN + F+ V++++ G L +L+ ++
Sbjct: 88 FTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQDYAQIAQKDKLNELQLRIRQL 147
Query: 532 HSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSD 353
+++I Q + R RE + R+ +E N +VF+WS+ + + + Q+ L+ FF
Sbjct: 148 LDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVLAITGAWQMRHLRGFFEA 207
Query: 352 K 350
K
Sbjct: 208 K 208
>M72149-1|AAA28063.1| 60|Caenorhabditis elegans ceh-15 protein.
Length = 60
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 581 SYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITRRQSGELV 709
+YTR ++L FH HK++ + ++ ++T RQ LV
Sbjct: 7 AYTRNQVLELEKEFHTHKYLTRKRRIEVAHSLMLTERQGQNLV 49
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = -3
Query: 697 ALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETS----AEEIH 530
A A Y+ NE ++H+ +L V PE G D V TQ++ + AE
Sbjct: 142 AAARSRYQRMTENERRVYNHRRRLKQLGVDPEH---GTNDVEGVRTQMKQANAKKAEAAR 198
Query: 529 SALNRIIDHQT---HHRLREAQGRKRAED 452
+R+ Q +HR EA R+R E+
Sbjct: 199 QRYHRMTPEQKRDYNHRRTEAFRRRRHEE 227
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/116 (19%), Positives = 52/116 (44%)
Frame = -3
Query: 718 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAE 539
++SH+ D + FS++ + H M + P+ G+G+ + +++ +
Sbjct: 198 FNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKNGLGNMRELKKRMKLTMA 257
Query: 538 EIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMIL 371
+ A ++ + +T+ + E + +L E WS + IVC F +++IL
Sbjct: 258 LVKMAKSQKMLEETNQMISEM-----SIELEENGGKWSSASLITIVCDVFNELLIL 308
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/116 (19%), Positives = 52/116 (44%)
Frame = -3
Query: 718 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAE 539
++SH+ D + FS++ + H M + P+ G+G+ + +++ +
Sbjct: 198 FNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKNGLGNMRELKKRMKLTMA 257
Query: 538 EIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMIL 371
+ A ++ + +T+ + E + +L E WS + IVC F +++IL
Sbjct: 258 LVKMAKSQKMLEETNQMISEM-----SIELEENGGKWSSASLITIVCDVFNELLIL 308
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans
nonsense-mediated mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/116 (19%), Positives = 52/116 (44%)
Frame = -3
Query: 718 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAE 539
++SH+ D + FS++ + H M + P+ G+G+ + +++ +
Sbjct: 198 FNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKNGLGNMRELKKRMKLTMA 257
Query: 538 EIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMIL 371
+ A ++ + +T+ + E + +L E WS + IVC F +++IL
Sbjct: 258 LVKMAKSQKMLEETNQMISEM-----SIELEENGGKWSSASLITIVCDVFNELLIL 308
>AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical
protein K05F6.4 protein.
Length = 390
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 629 VYGTKCWTGAASSWCRRSCNCSYTVGDICRRNSFCTQQNH 510
++ T W+ A C RS + S + D R + FCT +H
Sbjct: 18 IFNTLPWSAIAVHPCLRSWHSSNSGADSKRADVFCTTHSH 57
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = -3
Query: 643 SHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRK 464
S++ +E N ++ L + ++ Q++ + + L +I D +T H+L A G
Sbjct: 126 SNENTVLEKNSQEKKKLEKQDPNKFIIRQMDKDLKNKINKLRKITD-ETEHKLELANGLS 184
Query: 463 RAEDLNEKV 437
+ D N+K+
Sbjct: 185 KYADKNQKI 193
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = -3
Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 455
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,828,364
Number of Sequences: 27780
Number of extensions: 279495
Number of successful extensions: 873
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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