Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B18
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          29   0.059
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      29   0.059
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          29   0.059
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    25   0.96 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   1.7  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   2.9  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   2.9  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   6.8  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVF 434
           E   PGV   +  + +L T  +   S LN  +  Q+H + +    + R   LN K F
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPF 498


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVF 434
           E   PGV   +  + +L T  +   S LN  +  Q+H + +    + R   LN K F
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPF 498


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 28.7 bits (61), Expect = 0.059
 Identities = 16/57 (28%), Positives = 25/57 (43%)
 Frame = -3

Query: 604 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVF 434
           E   PGV   +  + +L T  +   S LN  +  Q+H + +    + R   LN K F
Sbjct: 68  ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPF 124


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.6 bits (51), Expect = 0.96
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -3

Query: 523 LNRIIDHQTHHRLREAQGRKRAEDLN---EKVFW 431
           L R  + +THH +R  + + R+ DLN   E++ W
Sbjct: 72  LLRFENPETHHPIRHGRRQSRSMDLNAHREQMSW 105


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 595 LPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLRE-AQGRKRA 458
           LPGV      ++QL T   + +  L+ +  HQ+  +  E  Q R RA
Sbjct: 462 LPGVTIQNVDVSQLVTLFTDFYVDLDAVTGHQSQQQQEEQTQSRVRA 508


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +2

Query: 551 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 688
           +++ K  C++   R  +L  ++  ++H  +    K+I  T+  ITR
Sbjct: 30  MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 75


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +2

Query: 551 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 688
           +++ K  C++   R  +L  ++  ++H  +    K+I  T+  ITR
Sbjct: 13  MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 58


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 166 LNFACYIYLCNNKKLCDRDNGYTINKEVF 252
           +NF  +   C ++ L    +G+ +N EVF
Sbjct: 106 INFITFDIPCEHRGLVSIIDGWELNGEVF 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,691
Number of Sequences: 438
Number of extensions: 3308
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)