Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_B17
(582 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 65 8e-12
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 55 9e-09
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 35 0.008
SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces pombe... 28 0.87
SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|... 28 1.1
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 28 1.1
SPCC970.11c |wtf9||wtf element, Wtf2, pseudo|Schizosaccharomyces... 28 1.1
SPAC323.07c |||MatE family transporter|Schizosaccharomyces pombe... 27 1.5
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 27 2.0
SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr ... 27 2.6
SPAC2F3.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 3.5
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 25 6.1
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 64.9 bits (151), Expect = 8e-12
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Frame = -1
Query: 579 RRACEDLPPFVLNKFYETGYTLFLGYWLHYLPYFFIDRTLFLHHYLPAYIFKILLLAYIV 400
+R LP V N FY + ++ Y HYLP+F + R LFLHHYLPA++ LL+ +
Sbjct: 630 QRGIRTLPETVRNHFYRSTMFFYMTYVFHYLPFFIMGRQLFLHHYLPAHLAGSLLVGAFI 689
Query: 399 D-----------HIYVVL----------QLHEKTRHVTNLFILCVTIWLSYIVLTFKKFS 283
V + + H K HV L +C + + ++ F F+
Sbjct: 690 QLACRKSFRSPVSAGVPIPKDVDEKGHSKCHRKYGHVIEL--ICTLLLIFVVIYCFTFFA 747
Query: 282 VLNYGNVDLKENDLMSLRWKDTWDFILHKK 193
+ YG+ L ++ +W D+W F K+
Sbjct: 748 PMTYGDKSLSVDEWTRRKWLDSWVFQYQKQ 777
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 54.8 bits (126), Expect = 9e-09
Identities = 32/109 (29%), Positives = 58/109 (53%)
Frame = -1
Query: 537 FYETGYTLFLGYWLHYLPYFFIDRTLFLHHYLPAYIFKILLLAYIVDHIYVVLQLHEKTR 358
F+ G FLG++ +YLPY+ + R L++HHY P+Y A++VD + ++ + R
Sbjct: 637 FHYAGIYPFLGWFFNYLPYYIMGRVLYVHHYEPSYALSTFTAAFVVD--WFTKKMPKIVR 694
Query: 357 HVTNLFILCVTIWLSYIVLTFKKFSVLNYGNVDLKENDLMSLRWKDTWD 211
V +FI I ++ + + FK + +G +D LRW ++W+
Sbjct: 695 VV--VFISLYAI-IAGVFIYFKDVTFGMHG----PASDFHRLRWLNSWN 736
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 35.1 bits (77), Expect = 0.008
Identities = 30/119 (25%), Positives = 51/119 (42%)
Frame = -1
Query: 564 DLPPFVLNKFYETGYTLFLGYWLHYLPYFFIDRTLFLHHYLPAYIFKILLLAYIVDHIYV 385
D P + Y G + + LH+ PY +FL+HYLPA F I L +
Sbjct: 602 DFGPSAFHYNYNIG-KFVVAWLLHWAPYILETDRVFLYHYLPALYFGIAALGVSWSFLGN 660
Query: 384 VLQLHEKTRHVTNLFILCVTIWLSYIVLTFKKFSVLNYGNVDLKENDLMSLRWKDTWDF 208
+ +T + L V I ++ + L ++ +S Y L ++ +L K +W+F
Sbjct: 661 AV-FGNRTAYKA----LSVII-MALMFLVYRLYSPFTY-MTTLTKSSCRALELKGSWNF 712
>SPCC1450.08c |wtf16||wtf element Wtf16|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 28.3 bits (60), Expect = 0.87
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 330 VTIWLSYIVLTFKKFSVLNYGNVDL 256
V IWL ++V+ F F + +GN++L
Sbjct: 154 VIIWLLWVVICFVLFGCIKFGNLNL 178
>SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|chr
3|||Manual
Length = 418
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 336 LCVTIWLSYIVLTFKKFSVLNYGNVDLKE 250
L VTIWL+++V+ F F + G ++L +
Sbjct: 208 LVVTIWLAWVVICFILFGCVKDGRLNLNK 236
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 27.9 bits (59), Expect = 1.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 336 LCVTIWLSYIVLTFKKFSVLNYGNVDLKE 250
L VTIWL+++V+ F F + G ++L +
Sbjct: 198 LVVTIWLAWVVICFILFGCVKDGRLNLNK 226
>SPCC970.11c |wtf9||wtf element, Wtf2, pseudo|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 333
Score = 27.9 bits (59), Expect = 1.1
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Frame = -1
Query: 522 YTLFLGYWLHYLPYFFIDRTLFLHHYLPAYIFKILLLAYIVDHIYVVLQLHEKTRHV--- 352
+TLF G+W I T F + A ++ LA V V L K V
Sbjct: 110 WTLF-GFWCFVCTLALIFLTYFYETWTKAVKVTVISLAQCVKVTAVFLAKCVKVTAVGLY 168
Query: 351 TNLFILCVTIWLSYIVLTFKKFSVLNYGNVDL 256
+ V IWL ++V+ + F +GN++L
Sbjct: 169 NSREKWVVIIWLLWVVICYTLFLRAKFGNLNL 200
>SPAC323.07c |||MatE family transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 27.5 bits (58), Expect = 1.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 463 SVPSSLFTCIYF*DSSFGLYCGSYLRSFTA 374
++P ++F +YF G++CG L S TA
Sbjct: 477 ALPVTVFVVVYFNTGLKGIWCGMILSSVTA 506
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 27.1 bits (57), Expect = 2.0
Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Frame = -1
Query: 567 EDLPPFVLNKFYETGYTLFLGYWLHYLPYFFIDR------TLFLHHYLPAYIFKILLLAY 406
ED P + ++ ++ Y + LG+WL + +++ +F HH + +++L+Y
Sbjct: 190 EDYPQYYMSPLFKAYYLIQLGFWLQQILVLHLEQRRADHWQMFAHHIVTC---ALIILSY 246
>SPAC17A2.05 |||fumerate reductase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 2.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 8 QSHRSLHPCNPFRPASFIV 64
++HR HP PF+P +F++
Sbjct: 156 RTHRGTHPDYPFKPLAFVL 174
>SPAC2F3.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 101
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -1
Query: 435 YIFKILLLAYIVDHIYVVLQLHEKTRHV 352
Y+ KILL++ I I ++L + E RH+
Sbjct: 16 YVIKILLISGISRIIILILAMFESIRHI 43
>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1402
Score = 25.4 bits (53), Expect = 6.1
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Frame = -1
Query: 318 LSYIVLTFKKFSV--LNYGNVDLKENDLMSLR-WKDTWDFILHKKT*FL*NKMSIVSL*D 148
L+ V+ FKK ++ + YG + M+ R KDT + L K++ ++M ++S
Sbjct: 574 LTQNVMEFKKCTINGVAYGEAFTEAMAGMAKREGKDTEELTLQKQSFIERDRMQMISQMR 633
Query: 147 YNHNKMYVVNNN 112
H+ Y+V++N
Sbjct: 634 NMHDNKYLVDDN 645
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,156,995
Number of Sequences: 5004
Number of extensions: 40530
Number of successful extensions: 115
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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