Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B17
         (582 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0395 + 13473159-13473929                                         27   8.2  
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161...    27   8.2  

>05_03_0395 + 13473159-13473929
          Length = 256

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = -1

Query: 498 LHYLPYFFIDRTLFLHHYLPAYIFKILLLAYIVDH----IYVVLQLHEKTRHVTNLFILC 331
           LHYL +   D     HH    ++F  +   Y+V H    + V+L L E T  + N++ L 
Sbjct: 103 LHYLAFLPGDTLFIAHHVATLFVF--VTCRYLVRHGAYALLVLLVLAEVTSLLQNVWTL- 159

Query: 330 VTIW 319
             IW
Sbjct: 160 AGIW 163


>04_03_1049 + 22015053-22015083,22015770-22015885,22016013-22016108,
            22016229-22016285,22016468-22016620,22016754-22016838,
            22017097-22017187,22017324-22017488,22017813-22017932,
            22018020-22018104,22018234-22018402,22019055-22019173,
            22019250-22019440,22019746-22019957,22020905-22021500,
            22022538-22022658,22023439-22023868,22024412-22024797,
            22024976-22025071,22025380-22025432,22026915-22027061,
            22027139-22027309,22027880-22027962,22028049-22028247,
            22028668-22028789,22029752-22029818,22029960-22030010,
            22030768-22031001,22031263-22031451,22032455-22032646,
            22032742-22032936
          Length = 1673

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 460  VPSSLFTCIYF*DSSFGLYCGSYLRSFTA 374
            +P + ++C YF D  FG   G+YL   TA
Sbjct: 1516 LPVTTYSCHYFLDPGFGAAIGNYLVHETA 1544


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,743,554
Number of Sequences: 37544
Number of extensions: 209949
Number of successful extensions: 413
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 413
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1364465340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)