BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_B17
(582 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 26 0.77
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 5.5
AF316637-1|AAG45165.1| 224|Anopheles gambiae glutathione S-tran... 23 7.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 7.2
AY825922-1|AAV70485.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825921-1|AAV70484.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825920-1|AAV70483.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825919-1|AAV70482.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825918-1|AAV70481.1| 161|Anopheles gambiae male sterility pro... 23 9.5
AY825917-1|AAV70480.1| 161|Anopheles gambiae male sterility pro... 23 9.5
AY825916-1|AAV70479.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825915-1|AAV70478.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825914-1|AAV70477.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825913-1|AAV70476.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825912-1|AAV70475.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825911-1|AAV70474.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825910-1|AAV70473.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825909-1|AAV70472.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825908-1|AAV70471.1| 168|Anopheles gambiae male sterility pro... 23 9.5
AY825907-1|AAV70470.1| 168|Anopheles gambiae male sterility pro... 23 9.5
AY825906-1|AAV70469.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825905-1|AAV70468.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825904-1|AAV70467.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825903-1|AAV70466.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825902-1|AAV70465.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825901-1|AAV70464.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825900-1|AAV70463.1| 148|Anopheles gambiae male sterility pro... 23 9.5
AY825899-1|AAV70462.1| 148|Anopheles gambiae male sterility pro... 23 9.5
AY825898-1|AAV70461.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825897-1|AAV70460.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825896-1|AAV70459.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825895-1|AAV70458.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825894-1|AAV70457.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825893-1|AAV70456.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825892-1|AAV70455.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825891-1|AAV70454.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825890-1|AAV70453.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825889-1|AAV70452.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825888-1|AAV70451.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825887-1|AAV70450.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825886-1|AAV70449.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825885-1|AAV70448.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825884-1|AAV70447.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825883-1|AAV70446.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825882-1|AAV70445.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825881-1|AAV70444.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825880-1|AAV70443.1| 167|Anopheles gambiae male sterility pro... 23 9.5
AY825879-1|AAV70442.1| 167|Anopheles gambiae male sterility pro... 23 9.5
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 26.2 bits (55), Expect = 0.77
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 480 FFIDRTLFLHHYLPAYIFKILLLAYIV 400
FF R + +LP IF +LL AY+V
Sbjct: 558 FFKKRISIVLEFLPQIIFLVLLFAYMV 584
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.4 bits (48), Expect = 5.5
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -1
Query: 387 VVLQLHEKTRHVTNLFILCVTIWLSYIVLTFKKFSVLNYGNVDLKENDL 241
VV L + + N+ ++C+ WL + ++ + F+ + VD + L
Sbjct: 1423 VVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCVDKNKTTL 1471
>AF316637-1|AAG45165.1| 224|Anopheles gambiae glutathione
S-transferase D8 protein.
Length = 224
Score = 23.0 bits (47), Expect = 7.2
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 299 VSTIYDSHIVTHNINKFVTCLVFS*SCKTT 388
VST+ +V H+++K+ + CK T
Sbjct: 161 VSTVTSLEVVQHDLSKYPAISAWYEGCKAT 190
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.0 bits (47), Expect = 7.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = +3
Query: 66 FFSTXXXFXVFNXLYNYYLQHTFYCDCNLIN 158
FFS F + ++NY + ++ C + N
Sbjct: 1634 FFSVHPDFDYYERMFNYAYRGNYHPSCAVSN 1664
>AY825922-1|AAV70485.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825921-1|AAV70484.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825920-1|AAV70483.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825919-1|AAV70482.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825918-1|AAV70481.1| 161|Anopheles gambiae male sterility
protein protein.
Length = 161
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 45 HFLPAYLFDALVRA 58
>AY825917-1|AAV70480.1| 161|Anopheles gambiae male sterility
protein protein.
Length = 161
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 45 HFLPAYLFDALVRA 58
>AY825916-1|AAV70479.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825915-1|AAV70478.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825914-1|AAV70477.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825913-1|AAV70476.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825912-1|AAV70475.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825911-1|AAV70474.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825910-1|AAV70473.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825909-1|AAV70472.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825908-1|AAV70471.1| 168|Anopheles gambiae male sterility
protein protein.
Length = 168
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825907-1|AAV70470.1| 168|Anopheles gambiae male sterility
protein protein.
Length = 168
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825906-1|AAV70469.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825905-1|AAV70468.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825904-1|AAV70467.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825903-1|AAV70466.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825902-1|AAV70465.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825901-1|AAV70464.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825900-1|AAV70463.1| 148|Anopheles gambiae male sterility
protein protein.
Length = 148
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825899-1|AAV70462.1| 148|Anopheles gambiae male sterility
protein protein.
Length = 148
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825898-1|AAV70461.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825897-1|AAV70460.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825896-1|AAV70459.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825895-1|AAV70458.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825894-1|AAV70457.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825893-1|AAV70456.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825892-1|AAV70455.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825891-1|AAV70454.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825890-1|AAV70453.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825889-1|AAV70452.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825888-1|AAV70451.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825887-1|AAV70450.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825886-1|AAV70449.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 47 HFLPAYLFDALVRA 60
>AY825885-1|AAV70448.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 47 HFLPAYLFDALVRA 60
>AY825884-1|AAV70447.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825883-1|AAV70446.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825882-1|AAV70445.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825881-1|AAV70444.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825880-1|AAV70443.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
>AY825879-1|AAV70442.1| 167|Anopheles gambiae male sterility
protein protein.
Length = 167
Score = 22.6 bits (46), Expect = 9.5
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 450 HYLPAYIFKILLLA 409
H+LPAY+F L+ A
Sbjct: 48 HFLPAYLFDALVRA 61
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,165
Number of Sequences: 2352
Number of extensions: 9511
Number of successful extensions: 60
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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