Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B15
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      27   0.54 
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.2  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   5.0  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   8.8  
AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450 pr...    23   8.8  

>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 27.1 bits (57), Expect = 0.54
 Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 350 HC-QSLGIAVMAYSPFGFVVSRGQTGAPP 267
           HC ++L  +++++ PFGF  S   T  PP
Sbjct: 34  HCARNLSHSLLSFGPFGFSCSSAPTMTPP 62


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 488 AAARPACLARFPDSRCYQENRQA 556
           A+  P CL    D+RCYQ  ++A
Sbjct: 855 ASMIPICLLVQEDARCYQRQQEA 877


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +1

Query: 55  LCF-LLNWLMAATSSNV 102
           +CF +LNW M   SSNV
Sbjct: 541 ICFNILNWCMLVRSSNV 557


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/26 (30%), Positives = 11/26 (42%)
 Frame = +1

Query: 52  PLCFLLNWLMAATSSNVNWKSNRSMF 129
           P+C  + W      S   WK  R+ F
Sbjct: 332 PICLNIPWYKPEDDSLTRWKEGRTGF 357


>AY748832-1|AAV28180.1|   69|Anopheles gambiae cytochrome P450
           protein.
          Length = 69

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 222 QEECWTDSTQIFDRQRSNPDS 160
           QE C+ +  ++ DR  S+P S
Sbjct: 1   QERCYGELQEVLDRSSSDPRS 21


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,241
Number of Sequences: 2352
Number of extensions: 15802
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)