BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_B11
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109125-1|AAI09126.1| 1037|Homo sapiens NLRP7 protein protein. 30 9.6
BC109124-1|AAI09125.1| 963|Homo sapiens NLRP7 protein protein. 30 9.6
AY154462-1|AAO18158.1| 980|Homo sapiens NALP7 protein. 30 9.6
AF464765-1|AAL69963.1| 980|Homo sapiens PYRIN-containing Apaf1-... 30 9.6
>BC109125-1|AAI09126.1| 1037|Homo sapiens NLRP7 protein protein.
Length = 1037
Score = 29.9 bits (64), Expect = 9.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 102 EEVKMDFVKVVXTRNIVDLSLDLRFRRCSIITI 4
+++ + K V N +D LD+ F RC+ +TI
Sbjct: 618 QKLSLQVAKGVFLENYMDFELDIEFERCTYLTI 650
>BC109124-1|AAI09125.1| 963|Homo sapiens NLRP7 protein protein.
Length = 963
Score = 29.9 bits (64), Expect = 9.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 102 EEVKMDFVKVVXTRNIVDLSLDLRFRRCSIITI 4
+++ + K V N +D LD+ F RC+ +TI
Sbjct: 618 QKLSLQVAKGVFLENYMDFELDIEFERCTYLTI 650
>AY154462-1|AAO18158.1| 980|Homo sapiens NALP7 protein.
Length = 980
Score = 29.9 bits (64), Expect = 9.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 102 EEVKMDFVKVVXTRNIVDLSLDLRFRRCSIITI 4
+++ + K V N +D LD+ F RC+ +TI
Sbjct: 618 QKLSLQVAKGVFLENYMDFELDIEFERCTYLTI 650
>AF464765-1|AAL69963.1| 980|Homo sapiens PYRIN-containing
Apaf1-like protein 3 protein.
Length = 980
Score = 29.9 bits (64), Expect = 9.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 102 EEVKMDFVKVVXTRNIVDLSLDLRFRRCSIITI 4
+++ + K V N +D LD+ F RC+ +TI
Sbjct: 618 QKLSLQVAKGVFLENYMDFELDIEFERCTYLTI 650
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,050,869
Number of Sequences: 237096
Number of extensions: 1455546
Number of successful extensions: 1448
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1448
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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