Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B09
         (737 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   3.4  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   3.4  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   5.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 252 HRPCDLRDLTLTDISFHLKNHYGFYFYNTG 163
           +R  +++ LT+  +SF+      FYF+ TG
Sbjct: 224 NRYFEVQVLTIFGVSFYFFISTFFYFFTTG 253


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -3

Query: 252 HRPCDLRDLTLTDISFHLKNHYGFYFYNTG 163
           +R  +++ LT+  +SF+      FYF+ TG
Sbjct: 220 NRYFEVQVLTIFGVSFYFFISTFFYFFTTG 249


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/45 (22%), Positives = 19/45 (42%)
 Frame = +2

Query: 20  FFFFSIRYVIEXLPCSWVEYQKHESSSIAIQTYIYTEITKSNTSF 154
           F F++     E +   W+  +  E     + TY+   I  +N+ F
Sbjct: 327 FTFWAFSNACEVMAIVWITSETCEEIVAGVTTYLVILIQFNNSDF 371


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 243 CDLRDLTLTDISFHLKNHYGFYFYNTGLG 157
           C L+ +     +F     YG  F NT LG
Sbjct: 245 CGLKKIEFCRPTFSAARFYGIDFSNTFLG 273


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,792
Number of Sequences: 336
Number of extensions: 3204
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)