Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_B08
(695 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 203 2e-53
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 175 5e-45
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 161 9e-41
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 146 2e-36
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 126 3e-30
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 2e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 98 1e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 72 9e-14
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 1.5
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.6
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.4
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.4
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.5
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 5.9
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 5.9
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 7.8
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 203 bits (496), Expect = 2e-53
Identities = 92/124 (74%), Positives = 101/124 (81%)
Frame = -3
Query: 693 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 514
TGEKG+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSM
Sbjct: 39 TGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSM 98
Query: 513 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKD 334
ANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T RIVI
Sbjct: 99 ANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRARIVIDK 158
Query: 333 CGQI 322
CG +
Sbjct: 159 CGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 175 bits (426), Expect = 5e-45
Identities = 77/102 (75%), Positives = 88/102 (86%)
Frame = -3
Query: 693 TGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSM 514
TGEKGFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSM
Sbjct: 64 TGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSM 123
Query: 513 ANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 388
ANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 124 ANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 161 bits (391), Expect = 9e-41
Identities = 75/115 (65%), Positives = 88/115 (76%)
Frame = -3
Query: 672 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 493
YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +T
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNT 110
Query: 492 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 328
NGSQFFITTV T LDG+HVVFG V++G V+ IE +++ +VI++CG
Sbjct: 111 NGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 146 bits (355), Expect = 2e-36
Identities = 67/124 (54%), Positives = 90/124 (72%), Gaps = 2/124 (1%)
Frame = -3
Query: 687 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMA 511
+K GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMA
Sbjct: 50 QKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMA 109
Query: 510 NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFGSQSGKTSKRIVIKD 334
NAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T + + + I +
Sbjct: 110 NAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVE 169
Query: 333 CGQI 322
CG++
Sbjct: 170 CGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 126 bits (304), Expect = 3e-30
Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -3
Query: 672 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 496
Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +
Sbjct: 38 YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPN 96
Query: 495 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 388
TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 97 TNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (272), Expect = 2e-26
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = -3
Query: 687 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMA 511
E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 510 NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 385
N+G +TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 545 NSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 97.9 bits (233), Expect = 1e-21
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -3
Query: 672 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 496
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 495 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 352
TNGSQFFI LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 71.7 bits (168), Expect = 9e-14
Identities = 39/87 (44%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Frame = -3
Query: 672 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGVLSMANAGAD 496
Y G+I HRV+P F++QGGD T G GG+SIYG F E L+ G++ MA +
Sbjct: 49 YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENE 107
Query: 495 TNGSQFFITTVKTSWLDGRHVVFGNVV 415
N SQFFIT T +G+ +FG VV
Sbjct: 108 GNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -1
Query: 671 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 519
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 362 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 448
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.4
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -2
Query: 490 WFPVLHHHC 464
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.4
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 328 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 486
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 395 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 544
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -3
Query: 618 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 472
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 5.9
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 377 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 556
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 557 SSSNL 571
SSS++
Sbjct: 222 SSSSI 226
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 7.8
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +1
Query: 406 HAFNNIPKDNMSAIQPGGLDSGDEELGTISISTGISHGEDARSSVLKG------EILVFK 567
H N P + P +S EL + IS+G+DA S VLK E++V +
Sbjct: 228 HELNESPSTPTAPDFPH-YNSSPSELSPTQRRSSISNGKDAPSPVLKDLTSYTQEVIVCR 286
Query: 568 LIAVDGLSPS 597
LSPS
Sbjct: 287 KFLHHSLSPS 296
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,875,058
Number of Sequences: 5004
Number of extensions: 60264
Number of successful extensions: 180
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 321151040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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