Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B07
         (317 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   1.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   6.4  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    21   8.4  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    21   8.4  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -3

Query: 99  VSVWEDNWEDDXIQDDFNQQLR 34
           +  W++ W+ D +Q D ++  R
Sbjct: 934 IDCWQEEWDADALQQDASRHTR 955


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -3

Query: 138  AENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXEGS 7
            A++ G ED +++D    ED+ +DD   DD       + E   GS
Sbjct: 1815 ADSNGGEDGNEDDD---EDDEDDDDDDDDTTTGEGNEHEADNGS 1855


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 126  GTEDADDEDVSVWE 85
            GT+D DDED   +E
Sbjct: 1059 GTDDIDDEDTYDYE 1072


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 126 GTEDADDEDVSVWEDNWEDDXIQDD 52
           G ED +DE+     D+ E+D   +D
Sbjct: 480 GEEDEEDEEDEYEGDDTEEDEEDED 504


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,879
Number of Sequences: 2352
Number of extensions: 4977
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21181083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)