Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_pT_B07
(317 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41515-1|AAA91179.1| 70|Homo sapiens DSS1 protein. 70 2e-12
CR456887-1|CAG33168.1| 70|Homo sapiens SHFM1 protein. 70 2e-12
BC032782-1|AAH32782.1| 70|Homo sapiens split hand/foot malform... 70 2e-12
AC073230-1|AAQ93368.1| 70|Homo sapiens unknown protein. 70 2e-12
U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation in... 30 1.3
BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1... 28 5.2
BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1... 28 5.2
AK056430-1|BAB71181.1| 658|Homo sapiens protein ( Homo sapiens ... 28 5.2
AC074378-1|AAY41024.1| 658|Homo sapiens unknown protein. 28 5.2
X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protei... 27 9.1
M61744-1|AAA36202.1| 140|Homo sapiens MHC binding protein-2 pro... 27 9.1
M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein. 27 9.1
DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding pr... 27 9.1
AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency ... 27 9.1
AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency ... 27 9.1
>U41515-1|AAA91179.1| 70|Homo sapiens DSS1 protein.
Length = 70
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = -3
Query: 195 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEK 19
KQ VDLG FPAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>CR456887-1|CAG33168.1| 70|Homo sapiens SHFM1 protein.
Length = 70
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = -3
Query: 195 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEK 19
KQ VDLG FPAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>BC032782-1|AAH32782.1| 70|Homo sapiens split hand/foot
malformation (ectrodactyly) type 1 protein.
Length = 70
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = -3
Query: 195 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEK 19
KQ VDLG FPAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>AC073230-1|AAQ93368.1| 70|Homo sapiens unknown protein.
Length = 70
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/59 (54%), Positives = 39/59 (66%)
Frame = -3
Query: 195 KQKVDLGXXXXXXXXXXFPAENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEK 19
KQ VDLG FPAE+W D +DED VWEDNW+DD ++DDF+ QLR +LEK
Sbjct: 5 KQPVDLGLLEEDDEFEEFPAEDWAGLD-EDEDAHVWEDNWDDDNVEDDFSNQLRAELEK 62
>U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation
initiation factor eIF3, p35 subunit protein.
Length = 258
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -3
Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
+ WG ED +DEDV +DNW+DD + +++ +++ E
Sbjct: 37 DRWGGED-EDEDV---KDNWDDDDDEKKEEAEVKPEVKISE 73
>BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1
protein.
Length = 709
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
E G E+ +ED V ED ED+ + +D ++ ++ E+ E
Sbjct: 201 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEE 241
>BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1
protein.
Length = 727
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
E G E+ +ED V ED ED+ + +D ++ ++ E+ E
Sbjct: 201 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEE 241
>AK056430-1|BAB71181.1| 658|Homo sapiens protein ( Homo sapiens
cDNA FLJ31868 fis, clone NT2RP7001962, highly similar to
Rattus norvegicus YT521 mRNA for RNA splicing-related
protein. ).
Length = 658
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
E G E+ +ED V ED ED+ + +D ++ ++ E+ E
Sbjct: 150 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEE 190
>AC074378-1|AAY41024.1| 658|Homo sapiens unknown protein.
Length = 658
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
E G E+ +ED V ED ED+ + +D ++ ++ E+ E
Sbjct: 150 EEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEE 190
>X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protein-2)
protein.
Length = 2500
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQQ 40
DA++ D +DN +DD +DDF+ Q
Sbjct: 1953 DAEESDGEDGDDNDDDDEDEDDFDDQ 1978
>M61744-1|AAA36202.1| 140|Homo sapiens MHC binding protein-2
protein.
Length = 140
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQQ 40
DA++ D +DN +DD +DDF+ Q
Sbjct: 103 DAEESDGEDGDDNDDDDEDEDDFDDQ 128
>M60119-1|AAB88218.1| 1833|Homo sapiens HIV-EP2/Schnurri-2 protein.
Length = 1833
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQQ 40
DA++ D +DN +DD +DDF+ Q
Sbjct: 1286 DAEESDGEDGDDNDDDDEDEDDFDDQ 1311
>DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding protein
1 protein.
Length = 2446
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQQ 40
DA++ D +DN +DD +DDF+ Q
Sbjct: 1899 DAEESDGEDGDDNDDDDEDEDDFDDQ 1924
>AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency virus
type I enhancer binding protein 2 protein.
Length = 2446
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQQ 40
DA++ D +DN +DD +DDF+ Q
Sbjct: 1899 DAEESDGEDGDDNDDDDEDEDDFDDQ 1924
>AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency virus
type I enhancer-binding protein 2 protein.
Length = 2446
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -3
Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQQ 40
DA++ D +DN +DD +DDF+ Q
Sbjct: 1899 DAEESDGEDGDDNDDDDEDEDDFDDQ 1924
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,977,306
Number of Sequences: 237096
Number of extensions: 641500
Number of successful extensions: 1828
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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