Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B07
         (317 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006714-3|AAK29724.3|   82|Caenorhabditis elegans Hypothetical ...    49   6e-07
AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical...    28   1.3  
Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical p...    27   2.2  
Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical pr...    27   2.2  
AF039053-11|AAC25879.1|  301|Caenorhabditis elegans Serpentine r...    27   2.2  
Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical pr...    27   3.9  
AF067947-7|AAK68397.2|  295|Caenorhabditis elegans Hypothetical ...    27   3.9  
Z93778-7|CAB07847.1|  800|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z81554-5|CAB04510.2|  401|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z81532-9|CAB04328.1|  800|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z75553-4|CAA99946.1|  389|Caenorhabditis elegans Hypothetical pr...    26   5.1  
U73476-1|AAB41492.1|  800|Caenorhabditis elegans cyclic nucleoti...    26   5.1  
U40029-8|AAA81128.2|  275|Caenorhabditis elegans Hypothetical pr...    26   5.1  
Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical p...    26   6.8  
Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical pr...    26   6.8  
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr...    25   8.9  

>AC006714-3|AAK29724.3|   82|Caenorhabditis elegans Hypothetical
           protein Y119D3B.15 protein.
          Length = 82

 Score = 49.2 bits (112), Expect = 6e-07
 Identities = 16/42 (38%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
 Frame = -3

Query: 141 PAENWGTE-DADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEK 19
           P + W    + +++DV+VWEDNW+D+  + +F++QL+++L K
Sbjct: 35  PVQEWAERAEGEEDDVNVWEDNWDDETHESEFSKQLKEELRK 76


>AL034488-12|CAD31697.1|  450|Caenorhabditis elegans Hypothetical
           protein Y54G11A.14 protein.
          Length = 450

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -3

Query: 120 EDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           +D ++ED    ED  ED+   D+ N++++++ E  E
Sbjct: 59  DDEEEEDEDEEEDEAEDEAEDDEENEEVKEEKEDEE 94



 Score = 25.4 bits (53), Expect = 8.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 120 EDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           ED D+E+ +  ED  EDD   DD +    ++ E  E
Sbjct: 34  EDEDEEEENEDEDEDEDDDNDDDEDDDEEEEDEDEE 69


>Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical
           protein R11A5.1b protein.
          Length = 896

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 120 EDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           ED DDED    ED  E+D  ++D  ++  +  E+ E
Sbjct: 576 EDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEE 611


>Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical
           protein R11A5.1a protein.
          Length = 906

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 120 EDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           ED DDED    ED  E+D  ++D  ++  +  E+ E
Sbjct: 586 EDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEE 621


>AF039053-11|AAC25879.1|  301|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 19 protein.
          Length = 301

 Score = 27.5 bits (58), Expect = 2.2
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +1

Query: 181 VYFLFVSHYTVMIIEIRKYHLL 246
           VY LFV  Y+++  E+RKYH L
Sbjct: 63  VYLLFVIAYSLIPEELRKYHNL 84


>Z81135-3|CAB03456.1|  251|Caenorhabditis elegans Hypothetical
           protein W01G7.4 protein.
          Length = 251

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 114 ADDEDVSVWEDNWEDD 67
           ADDED S  EDNW +D
Sbjct: 171 ADDEDDSNDEDNWRND 186


>AF067947-7|AAK68397.2|  295|Caenorhabditis elegans Hypothetical
           protein T10B5.3 protein.
          Length = 295

 Score = 26.6 bits (56), Expect = 3.9
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -3

Query: 138 AENWGTEDADDEDVSVWEDNWEDDXIQDD 52
           +E++ T  +DD+  S  +D WED+ +++D
Sbjct: 226 SEDFDTIGSDDDGESSEDDWWEDNELKED 254


>Z93778-7|CAB07847.1|  800|Caenorhabditis elegans Hypothetical
           protein F36F2.5 protein.
          Length = 800

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 129 WGTEDADDEDVSVWEDNWEDDXIQDDFN 46
           W T   DD+D   W D  +   + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759


>Z81554-5|CAB04510.2|  401|Caenorhabditis elegans Hypothetical
           protein F57G4.8 protein.
          Length = 401

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 117 DADDEDVSVWEDNWEDDXIQDDFNQ 43
           D DDEDV  W +N +D     ++ +
Sbjct: 140 DNDDEDVQYWRENVDDKGFTIEYRE 164


>Z81532-9|CAB04328.1|  800|Caenorhabditis elegans Hypothetical
           protein F36F2.5 protein.
          Length = 800

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 129 WGTEDADDEDVSVWEDNWEDDXIQDDFN 46
           W T   DD+D   W D  +   + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759


>Z75553-4|CAA99946.1|  389|Caenorhabditis elegans Hypothetical
           protein ZC443.4 protein.
          Length = 389

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -3

Query: 120 EDADDEDVSVWEDNWEDD-XIQDDFNQQLRQQ 28
           ED DD+D    E+N EDD  ++DD + +   Q
Sbjct: 277 EDDDDDDDEEEEENVEDDENLEDDEDDRTEDQ 308


>U73476-1|AAB41492.1|  800|Caenorhabditis elegans cyclic
           nucleotide-gated channel protein.
          Length = 800

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 129 WGTEDADDEDVSVWEDNWEDDXIQDDFN 46
           W T   DD+D   W D  +   + +DF+
Sbjct: 732 WSTLQRDDDDEEEWNDEEDLSDVGEDFD 759


>U40029-8|AAA81128.2|  275|Caenorhabditis elegans Hypothetical
           protein F10G7.3 protein.
          Length = 275

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = -3

Query: 141 PAENWGTEDADDE--DVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           P  + G ED D+E  D    E N E+  + + FN++L   L+  E
Sbjct: 179 PLNDDGQEDDDEEEEDDDEMEANAEEVDLNESFNERLANALDGAE 223


>Z75710-9|CAB00024.2|  752|Caenorhabditis elegans Hypothetical
           protein D1081.3 protein.
          Length = 752

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 120 EDADDEDVSVWEDNWEDDXIQDDF 49
           +D DDED   +ED+ E+D I D++
Sbjct: 718 DDDDDEDCDDFEDD-EEDVIDDEY 740


>Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical
           protein C34C6.6b protein.
          Length = 500

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = -3

Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           +NW  +  + +D    E+ W+D    +   +++++ +EK E
Sbjct: 157 QNWADDFMEQQDNYGMENTWKDAQAFEQRWEEIKRDMEKDE 197


>Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical
           protein C34C6.6a protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 6.8
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = -3

Query: 135 ENWGTEDADDEDVSVWEDNWEDDXIQDDFNQQLRQQLEKXE 13
           +NW  +  + +D    E+ W+D    +   +++++ +EK E
Sbjct: 159 QNWADDFMEQQDNYGMENTWKDAQAFEQRWEEIKRDMEKDE 199


>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
            F18C12.1 protein.
          Length = 4171

 Score = 25.4 bits (53), Expect = 8.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 117  DADDEDVSVWEDNWEDDXIQDDFNQQL 37
            D  DED+  +EDNW    I + FN +L
Sbjct: 1079 DEIDEDIKQFEDNW---LIYEMFNNEL 1102


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,206,594
Number of Sequences: 27780
Number of extensions: 113230
Number of successful extensions: 449
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 366105812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)