Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_B02
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QQ27 Cluster: GLP_334_12709_16749; n=1; Giardia lambl...    34   3.2  
UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome...    33   9.7  

>UniRef50_Q7QQ27 Cluster: GLP_334_12709_16749; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_334_12709_16749 - Giardia lamblia
           ATCC 50803
          Length = 1346

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 16/66 (24%), Positives = 30/66 (45%)
 Frame = -2

Query: 297 DYGVFRFDSYSFSNDTFHNVLNGCTKTWHKKFVSVSFL*FSQIVVPKLXDINYFVVPEGN 118
           D  +F F +       FHN++  C K  H K        F+ I+ P++ +  Y +   G+
Sbjct: 555 DGNIFYFRNLDVKQSAFHNIVPLCAKLPHLKAADA----FTSIITPQVPNFCYCLTKMGS 610

Query: 117 LYYIXY 100
           +Y + +
Sbjct: 611 IYQVAF 616


>UniRef50_UPI0000DB6C86 Cluster: PREDICTED: similar to proteasome
           (prosome, macropain) 26S subunit, non-ATPase, 2; n=1;
           Apis mellifera|Rep: PREDICTED: similar to proteasome
           (prosome, macropain) 26S subunit, non-ATPase, 2 - Apis
           mellifera
          Length = 871

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
 Frame = +1

Query: 445 QLDICNPV*IQK-YKTVKDDTTFNFRRNGKVRCERLLTFLQATARVGFGDDTAPDDVLEC 621
           +LDI  P      YKT  +  T     +   R     TF+      GFG D   D+  EC
Sbjct: 306 ELDILEPKHPDDIYKTWLETNTLRRAEHDSARANLAATFVSGFVHAGFGQDKLMDNTSEC 365

Query: 622 YSFSYK 639
           + +  K
Sbjct: 366 WVYKNK 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,505,906
Number of Sequences: 1657284
Number of extensions: 11033405
Number of successful extensions: 23874
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23862
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)