Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_A23
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-5|CAB05227.1|  333|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81051-1|CAB02862.3|  677|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z82274-5|CAB05227.1|  333|Caenorhabditis elegans Hypothetical
           protein JC8.7 protein.
          Length = 333

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -1

Query: 397 VP*LYFLENKLKHNIMSFCTKC 332
           +P L  + N+++H I+ FCT+C
Sbjct: 133 IPDLSVVGNEIRHAILDFCTRC 154


>Z83238-7|CAB05797.1|  313|Caenorhabditis elegans Hypothetical
           protein T08G3.8 protein.
          Length = 313

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 620 IYNIEAIIVLILFCYYIINMCTVSYTTCLNTILFNYY 510
           IY++  + +LI   YY +      Y+T L+ +LF  +
Sbjct: 23  IYSMPTVYILIKLSYYFLYRKNKCYSTDLHPVLFRQF 59


>Z81051-1|CAB02862.3|  677|Caenorhabditis elegans Hypothetical
           protein C55A6.2 protein.
          Length = 677

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 50  SSRPYGAAARASTAYTYLLFGEASLNKPTTSLKLNISLRVRVSESI*HNIT 202
           +SRPY  +A ++ +  Y+     S+NK +TS   N S+    SE + H  T
Sbjct: 266 ASRPYDTSASSADSNEYVHLTNYSINKNSTSFVRNESMS---SEDLGHKWT 313


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,168,068
Number of Sequences: 27780
Number of extensions: 220646
Number of successful extensions: 410
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)