Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_pT_A15
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.6  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.4  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 311 SHFNPEHKDHGHPNDVNRHV 252
           S F+ + KD G PND N ++
Sbjct: 345 SSFDFQSKDQGPPNDGNGNI 364


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 323 HNRRSGRLSHARESHIHPEAAQ 388
           HN RS   SHA+ S I  E  +
Sbjct: 260 HNERSTPRSHAKPSLIDDEPTE 281


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 323 HNRRSGRLSHARESHIHPEAAQ 388
           HN RS   SHA+ S I  E  +
Sbjct: 260 HNERSTPRSHAKPSLIDDEPTE 281


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 323 HNRRSGRLSHARESHIHPEAAQ 388
           HN RS   SHA+ S I  E  +
Sbjct: 260 HNERSTPRSHAKPSLIDDEPTE 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,123
Number of Sequences: 438
Number of extensions: 3660
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)