Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_P22
(706 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219... 63 2e-10
10_08_0682 + 19858131-19858230,19858313-19858954,19859041-198600... 54 8e-08
08_02_0598 - 19149218-19149524,19150325-19150896,19151374-191517... 54 8e-08
04_04_0862 + 28843654-28844386,28844486-28844895,28844995-288455... 53 2e-07
02_05_0304 + 27721413-27721479,27721561-27722208,27722399-277233... 52 4e-07
09_03_0047 - 11867302-11867356,11867461-11868032,11868485-118688... 50 2e-06
03_01_0127 + 988066-988171,988259-988881,988986-989396,989463-99... 50 2e-06
01_07_0255 - 42322111-42322308,42322658-42322750,42323127-423233... 30 1.6
05_01_0335 + 2652334-2652340,2652459-2652550,2652642-2653362,265... 30 2.1
03_05_0880 - 28450248-28450458,28451911-28452013,28452135-284522... 30 2.1
02_05_0568 - 30034280-30034393,30034888-30035163,30035246-300353... 30 2.1
10_08_0579 - 18906626-18907042 29 3.6
08_02_0843 - 21759183-21759556,21760255-21762913 29 3.6
02_05_0717 + 31190626-31191234,31191954-31192394,31192699-311928... 29 3.6
11_04_0412 + 17374651-17375196 28 6.3
07_03_0536 - 19205515-19205686,19205807-19205931,19206428-192065... 28 8.3
01_01_0931 - 7351306-7351371,7351620-7351772,7352343-7352484,735... 28 8.3
>06_03_0980 +
26520832-26520922,26521021-26521409,26521612-26521927,
26522869-26523769,26524103-26524184
Length = 592
Score = 63.3 bits (147), Expect = 2e-10
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 4/139 (2%)
Frame = +3
Query: 174 ANVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDP---PSIANSPGYSLIT 344
A A+ +YD+I+VGGG+AGC LA L VL++E G P P +A + G+
Sbjct: 47 AETAAEEAYDYIVVGGGTAGCPLAATLAGPGGGRVLVLERGGAPAEFPPLATAGGFVRTL 106
Query: 345 STLLPNWGYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENG 524
+ P F+S+ + + R ++LGG++S+N+ FY R + + + E G
Sbjct: 107 AMADPAPESDAPAQTFASE----DGVPNVRARVLGGATSINAGFYSRAHPDWFRSHGEGG 162
Query: 525 NE-GWDWNTVIQYFKKSER 578
WD V ++ ER
Sbjct: 163 EAMNWDMKLVNSSYEWVER 181
>10_08_0682 +
19858131-19858230,19858313-19858954,19859041-19860016,
19860105-19860147
Length = 586
Score = 54.4 bits (125), Expect = 8e-08
Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 4/140 (2%)
Frame = +3
Query: 171 HA-NVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPPSIANSPGYSLITS 347
HA + P SSY++I++GGG+AGC LA L+E + VLL+E G P AN T
Sbjct: 44 HAQDAPLVSSYNYIVIGGGTAGCPLAATLSEHSR--VLLLERGGLP--YANMSSEQHFTD 99
Query: 348 TLLPNWGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAE 518
L + +S Q+F S + + R ++LGG S LN+ FY R + +Y
Sbjct: 100 AL--------ADTSPASPAQRFISEDGVVNARARVLGGGSCLNAGFYTRASN-EYVR--- 147
Query: 519 NGNEGWDWNTVIQYFKKSER 578
GWD V ++ ER
Sbjct: 148 --ASGWDARLVNSSYRWVER 165
>08_02_0598 -
19149218-19149524,19150325-19150896,19151374-19151762,
19151850-19152163,19152312-19152356,19153451-19153805,
19154361-19154430
Length = 683
Score = 54.4 bits (125), Expect = 8e-08
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +3
Query: 195 SYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPPSIANSPGYSLITSTLLPNWGYF 374
+YD+IIVGGG+AGC LA L++ + VLL+E G P Y + L N+
Sbjct: 49 AYDYIIVGGGTAGCPLAATLSQ--KYKVLLLERGGSP--------YGNRNISHLENFHIC 98
Query: 375 GVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 491
+D +S Q F S + + R K+LGG +S+N+ FY R +
Sbjct: 99 LADDSPNSPSQGFISTDGVINARAKVLGGGTSVNAGFYSRAD 140
>04_04_0862 +
28843654-28844386,28844486-28844895,28844995-28845560,
28845737-28845803
Length = 591
Score = 53.2 bits (122), Expect = 2e-07
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Frame = +3
Query: 183 PADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPPSIANSPGYSLITSTLLPN 362
P S YD+IIVGGG+AGC LA L++ + VLL+E G P + TL
Sbjct: 44 PQVSYYDYIIVGGGTAGCPLAATLSQ--RFRVLLLERGGSPYDDERIGNMTRFADTL--- 98
Query: 363 WGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGN 491
+ SS Q+F S + ++R ++LGG S +N+ FY R +
Sbjct: 99 -----SDTSPSSPAQRFVSEDGVINSRPRVLGGGSCINAGFYTRAS 139
>02_05_0304 +
27721413-27721479,27721561-27722208,27722399-27723371,
27724196-27724237,27724379-27724466,27724911-27725016,
27726499-27726614
Length = 679
Score = 52.0 bits (119), Expect = 4e-07
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +3
Query: 183 PADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPPSIANSPGYSLITSTLLPN 362
P + YD+II+GGG+AGC LA L+E + VLL+E G P A + L
Sbjct: 38 PVMAYYDYIIIGGGTAGCPLAATLSE--RYRVLLLERGGSPYDDARVLNMAHFADVLADT 95
Query: 363 WGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVR 485
G +S Q+F S + + R ++LGG S +N+ F+ R
Sbjct: 96 SG--------ASPSQRFVSEDGVINARPRVLGGGSCINAGFFTR 131
>09_03_0047 -
11867302-11867356,11867461-11868032,11868485-11868873,
11869018-11869331,11871028-11871382,11872004-11872076
Length = 585
Score = 50.0 bits (114), Expect = 2e-06
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Frame = +3
Query: 195 SYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDP---PSIANSPGYSLITSTLLPNW 365
+YD+I+VGGG+AGC LA L+ + VLL+E G P +++ + + S + P
Sbjct: 50 TYDYIVVGGGTAGCPLAATLS--LKYKVLLLERGGSPYGNRNVSYMENFHIGLSNMAP-- 105
Query: 366 GYFGVNDDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVR--GNRADYDNWAEN-GNEGW 536
D S + + R ++LGG + +N+ FY R N W E+ NE +
Sbjct: 106 ------DSASQAFISTDGVINARARVLGGGTCINAGFYSRASSNFIQEVGWDEDLVNESF 159
Query: 537 DW--NTVIQYFK 566
W + ++Q+ K
Sbjct: 160 PWVEDKIVQWPK 171
>03_01_0127 +
988066-988171,988259-988881,988986-989396,989463-990037,
990137-990194
Length = 590
Score = 50.0 bits (114), Expect = 2e-06
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
Frame = +3
Query: 162 YPAHA-NVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPPSIANSPGYSL 338
+ HA + P S Y++I+VGGG+AGC LA L+E + VLL+E G P N
Sbjct: 44 FARHARDAPLVSYYNYIVVGGGTAGCPLAATLSERSR--VLLLERGGLPYGNRNVSSEYH 101
Query: 339 ITSTLLPNWGYFGVNDDFSSQGQKFKS---IRHTRGKMLGGSSSLNSMFYVRGNRADYDN 509
L + S Q+F S + + R ++LGG S LN+ FY R + + Y
Sbjct: 102 FADAL--------ADTSPRSPAQRFVSEDGVVNARARVLGGGSCLNAGFYTRAS-SGYVR 152
Query: 510 WAENGNEGWDWNTVIQYFKKSER 578
A GWD V ++ ER
Sbjct: 153 AA-----GWDPRLVNASYRWVER 170
>01_07_0255 -
42322111-42322308,42322658-42322750,42323127-42323344,
42323476-42323642,42324097-42324207,42324267-42324409,
42324492-42324710,42324975-42325055,42325202-42325381,
42325971-42326301,42326775-42326888,42327036-42327127,
42327631-42328059
Length = 791
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 189 DSSYDFIIVGGGSAGCVLANRLTEVANWTVLL 284
+ YD I+VGGG AGC A + T+LL
Sbjct: 102 EERYDVIVVGGGHAGCEAALASARLGARTLLL 133
>05_01_0335 +
2652334-2652340,2652459-2652550,2652642-2653362,
2653456-2653533,2653658-2653684,2653871-2653938,
2654089-2654174,2654251-2654333,2654478-2654620,
2654709-2654810,2654906-2655199,2655282-2655404,
2655733-2656119
Length = 736
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +3
Query: 384 DDFSSQGQKFKSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDWNTV 551
+D ++ + K ++ +GK+ G ++S+F G D+ +++ + +DWNTV
Sbjct: 97 EDLETERRLAKKLKVKKGKLGGPDDGMDSLFADLGFEGDFG--SDDEAKEFDWNTV 150
>03_05_0880 -
28450248-28450458,28451911-28452013,28452135-28452280,
28452629-28452801,28453267-28453539
Length = 301
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 516 ENGNEGWDWNTVIQYFKKSER 578
ENG+E W W TV+ Y+ +S R
Sbjct: 281 ENGSEKWIWKTVVLYYIESFR 301
>02_05_0568 -
30034280-30034393,30034888-30035163,30035246-30035371,
30035595-30035753,30035893-30036063,30036374-30036493,
30036565-30036924,30038800-30039686,30039790-30040363,
30041379-30041507,30042423-30042494,30042572-30042728,
30042974-30043023,30043569-30044327
Length = 1317
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 322 LLAMLGGSSPASINNTVQLATSVSLLASTQPADPPPTI 209
L+ +LG S PA ++++ + S A+ QP P P +
Sbjct: 117 LMQLLGSSGPAHLDSSASMPPPASEFAAAQPPQPIPAM 154
>10_08_0579 - 18906626-18907042
Length = 138
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = -1
Query: 322 LLAMLGGSSPASINNTVQLATSVSLLASTQPADPPPTIMKS*LESAGTLA*AGYRGXPIS 143
L A+LG + +A + LLA + A+PP ++ + AG +A A +G +
Sbjct: 13 LAAVLGAAVLHGAGGVAAVAMARPLLAGSGGAEPPSAVLAAAPGPAGVVAAA--QGGGVM 70
Query: 142 KDDRAI 125
K DR+I
Sbjct: 71 KPDRSI 76
>08_02_0843 - 21759183-21759556,21760255-21762913
Length = 1010
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = -1
Query: 397 LEKSSFTPKYPQFGSKVEVISE*PGLLAMLGGSSPASINNTVQLATSVSLLASTQPADPP 218
L+++ F+ P S+++++ E +LGGS P+S+ V+L +++L + D P
Sbjct: 502 LQENKFSGGIPDSLSQLDMLIELQLGGNILGGSIPSSLGKLVKLGIALNLSRNGLVGDIP 561
Query: 217 P 215
P
Sbjct: 562 P 562
>02_05_0717 +
31190626-31191234,31191954-31192394,31192699-31192802,
31193000-31194384,31194508-31194548,31195065-31195133,
31195335-31195435,31195747-31195825,31195939-31196037,
31196119-31196187,31197609-31197658,31197749-31197925,
31198045-31198152,31198224-31198290
Length = 1132
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
Frame = +3
Query: 186 ADSSYDFIIVGGGSAGCVL-------ANRLTEVANWTVLLIEAGDDP 305
+D YD + G G A + A L+ NW +L+ G+DP
Sbjct: 215 SDGFYDLYVTGNGPASITMPSLKDLRAQSLSHRVNWEAVLVHRGEDP 261
>11_04_0412 + 17374651-17375196
Length = 181
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 531 GWDWNTVIQYFKKSERLDDNHIL 599
G DW V++Y+++SER +N +L
Sbjct: 36 GPDWRHVVEYWEESERRPNNKVL 58
>07_03_0536 -
19205515-19205686,19205807-19205931,19206428-19206554,
19206653-19206777,19207616-19207708,19207779-19208052,
19208138-19208269,19208391-19208470,19209049-19209117,
19209227-19209343,19209416-19209484,19209839-19209892,
19210012-19210049,19211243-19211354,19211497-19211619,
19211728-19211755,19212048-19212104,19212984-19213028,
19213340-19213361,19213817-19213844,19214338-19214418
Length = 656
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -1
Query: 322 LLAMLGGSSPASINNTVQLATSVSLLASTQPADPP 218
+L LG S +S+ + + ATSV S P++PP
Sbjct: 594 MLHRLGSSKESSLQSLQETATSVFAKKSEPPSEPP 628
>01_01_0931 -
7351306-7351371,7351620-7351772,7352343-7352484,
7352604-7352791,7353117-7353179,7353541-7353585,
7353658-7353792,7354515-7354623,7355032-7355084,
7355168-7355317,7355714-7355722,7356161-7356577
Length = 509
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 541 GIQSFSTLRKVKDSMTIIS*AVNPQTYTXTKDTSESRDRCGSLSTK 678
G + K + + + A+ TYT D + RDRCG TK
Sbjct: 378 GAHRWHNYMKTPNEIKLEEAAILHYTYTKFSDLTSRRDRCGCKPTK 423
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,519,106
Number of Sequences: 37544
Number of extensions: 329780
Number of successful extensions: 920
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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