Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P22
         (706 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase p...    90   6e-18
AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase p...    62   1e-09
X15722-1|CAA33744.1|  479|Homo sapiens protein ( Human mRNA for ...    32   2.3  
BC069244-1|AAH69244.1|  522|Homo sapiens glutathione reductase p...    32   2.3  
AY338490-1|AAP88037.1|  479|Homo sapiens glutathione reductase p...    32   2.3  
AF228704-1|AAF37574.1|  522|Homo sapiens mitochondrial glutathio...    32   2.3  
AF228703-2|AAF37573.1|  479|Homo sapiens cytosolic glutathione r...    32   2.3  
AF228703-1|AAF37572.1|  522|Homo sapiens mitochondrial glutathio...    32   2.3  
AK128515-1|BAC87474.1|  581|Homo sapiens protein ( Homo sapiens ...    31   5.3  
AF208018-1|AAF15900.1|  497|Homo sapiens thioredoxin reductase p...    30   7.0  
BC044787-1|AAH44787.1|  527|Homo sapiens monoamine oxidase A pro...    30   9.3  

>BC034502-1|AAH34502.1|  594|Homo sapiens choline dehydrogenase
           protein.
          Length = 594

 Score = 90.2 bits (214), Expect = 6e-18
 Identities = 52/141 (36%), Positives = 80/141 (56%), Gaps = 5/141 (3%)
 Frame = +3

Query: 168 AHANVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGD-DPPSIANSPGYSL-I 341
           A A   +   Y +++VG GSAGCVLA RLTE     VLL+EAG  D  + +    + + +
Sbjct: 31  ASAGSESRDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHM 90

Query: 342 TSTLLPNWGYFGVNDDFSSQGQKF---KSIRHTRGKMLGGSSSLNSMFYVRGNRADYDNW 512
            + L+ N      N  + ++ Q+    + +   RG++ GGSSSLN+M YVRG+  DY+ W
Sbjct: 91  PAALVANLCDDRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERW 150

Query: 513 AENGNEGWDWNTVIQYFKKSE 575
              G  GWD+   + YF+K++
Sbjct: 151 QRQGARGWDYAHCLPYFRKAQ 171


>AJ272267-1|CAB75961.1|  482|Homo sapiens choline dehydrogenase
           protein.
          Length = 482

 Score = 62.5 bits (145), Expect = 1e-09
 Identities = 24/48 (50%), Positives = 34/48 (70%)
 Frame = +3

Query: 432 RGKMLGGSSSLNSMFYVRGNRADYDNWAENGNEGWDWNTVIQYFKKSE 575
           RG++ GGSSSLN+M YVRG+  DY+ W   G  GWD+   + YF+K++
Sbjct: 12  RGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQ 59


>X15722-1|CAA33744.1|  479|Homo sapiens protein ( Human mRNA for
           glutathione reductase (EC 1.6.4.2). ).
          Length = 479

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEV 263
           A +SYD++++GGGS G   A R  E+
Sbjct: 18  AVASYDYLVIGGGSGGLASARRAAEL 43


>BC069244-1|AAH69244.1|  522|Homo sapiens glutathione reductase
           protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEV 263
           A +SYD++++GGGS G   A R  E+
Sbjct: 61  AVASYDYLVIGGGSGGLASARRAAEL 86


>AY338490-1|AAP88037.1|  479|Homo sapiens glutathione reductase
           protein.
          Length = 479

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEV 263
           A +SYD++++GGGS G   A R  E+
Sbjct: 18  AVASYDYLVIGGGSGGLASARRAAEL 43


>AF228704-1|AAF37574.1|  522|Homo sapiens mitochondrial glutathione
           reductase protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEV 263
           A +SYD++++GGGS G   A R  E+
Sbjct: 61  AVASYDYLVIGGGSGGLASARRAAEL 86


>AF228703-2|AAF37573.1|  479|Homo sapiens cytosolic glutathione
           reductase protein.
          Length = 479

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEV 263
           A +SYD++++GGGS G   A R  E+
Sbjct: 18  AVASYDYLVIGGGSGGLASARRAAEL 43


>AF228703-1|AAF37572.1|  522|Homo sapiens mitochondrial glutathione
           reductase protein.
          Length = 522

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEV 263
           A +SYD++++GGGS G   A R  E+
Sbjct: 61  AVASYDYLVIGGGSGGLASARRAAEL 86


>AK128515-1|BAC87474.1|  581|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46672 fis, clone TRACH3009008, highly  similar
           to Thioredoxin reductase (EC 1.6.4.5). ).
          Length = 581

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 177 NVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLI 287
           ++P    YD II+GGGS G   A    +     ++L+
Sbjct: 105 DLPKSYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLV 141


>AF208018-1|AAF15900.1|  497|Homo sapiens thioredoxin reductase
           protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 177 NVPADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGDDPP 308
           ++P    YD II+GGGS G   A    +     V++++ G   P
Sbjct: 6   DLPKSYDYDLIIIGGGSGGLAAAKEPAQYGK-KVMVLDFGTPTP 48


>BC044787-1|AAH44787.1|  527|Homo sapiens monoamine oxidase A
           protein.
          Length = 527

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +3

Query: 186 ADSSYDFIIVGGGSAGCVLANRLTEVANWTVLLIEAGD 299
           A   +D +++GGG +G   A  LTE  + +VL++EA D
Sbjct: 10  AGHMFDVVVIGGGISGLSAAKLLTEY-DVSVLVLEARD 46


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,029,457
Number of Sequences: 237096
Number of extensions: 1754772
Number of successful extensions: 3769
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3768
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)