Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P20
         (767 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   3.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   6.2  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.2  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 544 VPSTPFCSLPDPCSV 500
           +   P+CSLP+ C++
Sbjct: 477 IKGQPYCSLPNSCAL 491


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 544 VPSTPFCSLPDPCSV 500
           +   P+CSLP+ C++
Sbjct: 484 IKGQPYCSLPNSCAL 498


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +3

Query: 234 QESGFHHSAYSFGIESHISQSNINGALVPPAAL 332
           + + FHH A  +G+ ++  +   +    PP +L
Sbjct: 187 ETASFHHDAAGYGLRNYGPEPVPSTPYPPPGSL 219


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 273 IESHISQSNINGALVPPAALLNIIQKGLQYTAAEITLGDNGTENRLT 413
           I ++  Q  I+ AL+  A  L        YT++++T       NR+T
Sbjct: 256 IATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVTREVQSRSNRMT 302


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +3

Query: 273 IESHISQSNINGALVPPAALLNIIQKGLQYTAAEITLGDNGTENRLT 413
           I ++  Q  I+ AL+  A  L        YT++++T       NR+T
Sbjct: 252 IATYDKQFYIHNALIVRALFLFFQLWATVYTSSQVTREVQSRSNRMT 298


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,538
Number of Sequences: 336
Number of extensions: 3174
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)