Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P18
         (607 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.5  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   6.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   6.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   6.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   6.1  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +1

Query: 346 SAGLSSYRRPT*SCRSRWTGGSTAPSPTSRTKGSVAHAGPSARRELWKDSTSVSPAT 516
           SA   +  R T S  S     S  P    R+  + ++  PS+ R+ +      SPA+
Sbjct: 120 SAAPRTASRETKSSESDSGASSADPDDELRSSSAFSYIKPSSERDYFSVKKLPSPAS 176


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 101 LQAAAPSQLRKRGRGQFPHED 163
           LQ   PSQ   R  G F HE+
Sbjct: 98  LQEPQPSQHCPRKHGYFAHEE 118


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 191 QTQPEVRNGPRFLQAGHEQVRRH 259
           QT P +  GPRF      +  +H
Sbjct: 63  QTHPSIGGGPRFSSGVGRKAWKH 85


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = +2

Query: 191 QTQPEVRNGPRFLQAGHEQVRRH 259
           QT P +  GPRF      +  +H
Sbjct: 63  QTHPSIGGGPRFSSGVGRKAWKH 85



 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3

Query: 440 LVLDVGDGAVLPPV 399
           LVL VG  A LPPV
Sbjct: 683 LVLQVGTHADLPPV 696


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 272 VREDYERLQQNCQTQQESV 328
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 272 VREDYERLQQNCQTQQESV 328
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 272 VREDYERLQQNCQTQQESV 328
           +REDY RL + C+   E +
Sbjct: 269 LREDYNRLCRLCKRVDEEI 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,379
Number of Sequences: 336
Number of extensions: 2744
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)