Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_P18
(607 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 7e-44
SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.) 171 5e-43
SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 143 1e-34
SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 97 1e-20
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06) 64 1e-10
SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0) 51 6e-07
SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 3e-06
SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40) 40 0.002
SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.078
SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8) 33 0.18
SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07) 33 0.24
SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07) 33 0.24
SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027) 32 0.31
SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40) 31 0.55
SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39) 30 1.7
SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035) 29 2.9
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 28 5.1
SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025) 28 5.1
SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10) 28 6.7
SB_55793| Best HMM Match : Spermine_synth (HMM E-Value=1.6e-15) 28 6.7
SB_15032| Best HMM Match : OEP (HMM E-Value=0.24) 27 8.9
>SB_4471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 331
Score = 173 bits (422), Expect = 7e-44
Identities = 87/171 (50%), Positives = 112/171 (65%)
Frame = +3
Query: 93 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 272
W A+K H Y ++ E+ R I+ + I HN+ G S+KL MN GDM E
Sbjct: 29 WKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNE----GKHSFKLAMNHLGDMTSLE 84
Query: 273 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGKCG 452
+T+ G K KH ++ +GA F+ PANVK+ + +DWR G VT +K+QG+CG
Sbjct: 85 ISQTLLGL-KLKKHAES------QPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCG 137
Query: 453 SCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDXAF 605
SCW+FSTTGALEGQHFR++G LVSLSEQNL+DCS +YGNNGC GGLMD AF
Sbjct: 138 SCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSGKYGNNGCEGGLMDNAF 188
>SB_11428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 521
Score = 171 bits (415), Expect = 5e-43
Identities = 85/178 (47%), Positives = 113/178 (63%)
Frame = +3
Query: 72 FDLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKY 251
FD ++ W A+KL H Y + E+ R I+ ++ I KHN + S+ L MN
Sbjct: 240 FDEDEQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGH----SFTLAMNHL 295
Query: 252 GDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDI 431
GD+ EF G H N K GS F++P++V++P+ VDWRK G VT +
Sbjct: 296 GDLTQDEFRYFYTGMRS---HYSNYTKKQGSA----FLAPSHVQVPDTVDWRKEGYVTPV 348
Query: 432 KDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDXAF 605
K+QG+CGSCW+FSTTG+LEGQ+F+++G LVSLSEQNL+DCS YGNNGC GGLMD AF
Sbjct: 349 KNQGQCGSCWAFSTTGSLEGQNFKKTGKLVSLSEQNLVDCSTAYGNNGCQGGLMDYAF 406
>SB_39998| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 1220
Score = 143 bits (346), Expect = 1e-34
Identities = 70/124 (56%), Positives = 85/124 (68%)
Frame = +3
Query: 234 LGMNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKH 413
+ MN GD+ EF G A HN K G A ++ P+NVK+P VDW +
Sbjct: 1 MAMNHLGDLTEDEFRYFYLGVR--AHHNST---KRG---WATYMPPSNVKIPSSVDWSQK 52
Query: 414 GAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLM 593
G VT +K+QG+CGSCW+FSTTG++EGQHFR++G LVSLSEQNLIDCS YGNNGC GGLM
Sbjct: 53 GYVTGVKNQGQCGSCWAFSTTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYGNNGCQGGLM 112
Query: 594 DXAF 605
D AF
Sbjct: 113 DNAF 116
>SB_17376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 105 bits (251), Expect = 4e-23
Identities = 43/56 (76%), Positives = 52/56 (92%)
Frame = +3
Query: 438 QGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDXAF 605
Q +CGSCW+FS+TG+LEGQHFR++G LVSLSEQNL+DCS++YGNNGC GGLMD AF
Sbjct: 342 QCQCGSCWAFSSTGSLEGQHFRKTGKLVSLSEQNLVDCSKKYGNNGCEGGLMDYAF 397
Score = 64.1 bits (149), Expect = 8e-11
Identities = 41/118 (34%), Positives = 59/118 (50%)
Frame = +3
Query: 93 WSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDMLHHE 272
W A+K H Y E ED R I+ ++ I+ KHN + SYKL MN + D+ E
Sbjct: 181 WHAWKDFHGKTYTGEEED-LRRAIWNDNLEIVKKHNAENH----SYKLDMNHFADLTVTE 235
Query: 273 FVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQGK 446
F + G+ + S G+ F+ +NV+LP +VDWR G VT +K+Q K
Sbjct: 236 FKQRFMGYRAASN----------STGGSTFLPLSNVQLPAEVDWRDKGFVTAVKNQEK 283
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 104 bits (250), Expect = 5e-23
Identities = 59/169 (34%), Positives = 89/169 (52%)
Frame = +3
Query: 81 VKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 260
V + + +H+ NY+ E + R + + + I N+++ Y L MN GD
Sbjct: 552 VHRVFDKYVKKHKKNYKDNKEHHTRREHFKHNLRFIHSKNRRH----AGYYLAMNHLGDR 607
Query: 261 LHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTDIKDQ 440
E ++ + G T +N L K ++ N +P++++W GAVT +KDQ
Sbjct: 608 SDKE-LRVLRGRRYTKGYNGGLPYKPD-------MASIN-DVPDEMNWVIRGAVTPVKDQ 658
Query: 441 GKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 587
CGSCWSF TTG +EG F ++ YL LS+QNL+DCS GNN C+GG
Sbjct: 659 AVCGSCWSFGTTGTIEGTLFLKTKYLTRLSQQNLMDCSWGEGNNACDGG 707
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 97.1 bits (231), Expect = 1e-20
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = +3
Query: 378 VKLPEQVDWRKHGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSE 557
V LP VDWRK GAV +K QG CGSC++F+ GALEG HF Q+G + LSEQ ++DC+
Sbjct: 497 VPLPPHVDWRKAGAVNSVKSQGICGSCYAFAVAGALEGAHFIQTGLKLDLSEQQIVDCTW 556
Query: 558 QYGNNGCNGG 587
+GN GC GG
Sbjct: 557 GFGNRGCKGG 566
Score = 33.9 bits (74), Expect = 0.10
Identities = 22/83 (26%), Positives = 36/83 (43%)
Frame = +3
Query: 75 DLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 254
DLV + + F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 1188 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 1243
Query: 255 DMLHHEFVKTMNGFNKTAKHNKN 323
D+ EF + + +K N
Sbjct: 1244 DLTDDEFKSYKDALDDESKDVMN 1266
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 288 NGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGAVTD 428
N NK +H K ++ K K S ++P+Q+DWR +G TD
Sbjct: 1386 NRKNKKKEHKKRMHAK-------KKRSKRMFEVPDQLDWRNYGNKTD 1425
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/100 (36%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Frame = +3
Query: 309 KHNKNLYMKGGSVRGAKF-ISPANVKLPEQVDWRKH-GAVTDIKDQGKCGSCWSFSTTGA 482
+HN Y++ + + K+ ++P + ++ +H GAV+ ++ QG CGSC++ + GA
Sbjct: 286 RHNMR-YIRSINRKNLKYKLAPNHFVDLTDGEYDQHKGAVSPVRGQGICGSCYALAAVGA 344
Query: 483 LEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGGLMDXA 602
+EG +F ++G L LS Q +IDCS GN GC GG + A
Sbjct: 345 VEGAYFMKTGKLKELSAQQVIDCSWGSGNRGCKGGYYNKA 384
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 81 VKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYGDM 260
++ + ++ QH Y+SE E + R I+ + I N+K + YKL N + D+
Sbjct: 257 IERMYRKYQGQHNKQYDSEHEVSKRKHIFRHNMRYIRSINRKN----LKYKLAPNHFVDL 312
Query: 261 LHHEF 275
E+
Sbjct: 313 TDGEY 317
>SB_29711| Best HMM Match : Peptidase_C1 (HMM E-Value=6.9e-06)
Length = 385
Score = 63.7 bits (148), Expect = 1e-10
Identities = 44/148 (29%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 75 DLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 254
D V + + F+ QH YE + E R I+ + I N++ + YKL +N +
Sbjct: 38 DPVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRRS----LPYKLELNHFP 93
Query: 255 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPE-QVDWRKHGAVTDI 431
D+ EF + +K N + N + E + D GAV
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMNDH-------DDVIDDDVNDETQEDEEDEPSDGAVNPA 146
Query: 432 KDQGKCGSCWSFSTTGALEGQHFRQSGY 515
K QG CGSCW+F+T GA+E HF Q G+
Sbjct: 147 KGQGTCGSCWAFATAGAVEAAHFIQEGF 174
>SB_49777| Best HMM Match : Peptidase_C1 (HMM E-Value=0)
Length = 298
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +3
Query: 402 WRKHGAVTDIKDQGKCGSCWSFSTTGALEGQH--FRQSGYLVSLSEQNLIDCSEQYGNNG 575
W + +++DQG CGSCW+F A+ ++ + + +S ++L+ C E G G
Sbjct: 95 WPHCPTIKEVRDQGACGSCWAFGAVEAMSDRYCIHSEGKVMPHISAEDLLSCCETCG-MG 153
Query: 576 CNGGLMDXAF 605
CNGG + A+
Sbjct: 154 CNGGYPESAW 163
>SB_39997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 240 MNKYGDMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRKHGA 419
MN++ DM EF + A + RGA F++P N++LP +VDWR+ G
Sbjct: 1 MNEFADMCEEEFRNVYLRYRFNASSPQ---------RGATFMAPNNLELPTKVDWRQQGY 51
Query: 420 VTDIKDQGK 446
VT +K+QGK
Sbjct: 52 VTPVKNQGK 60
>SB_28131| Best HMM Match : Peptidase_C1 (HMM E-Value=1.2e-40)
Length = 295
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 507 SGYLVSLSEQNLIDCSEQYGNNGCNGG 587
+G L SEQ L+DCS +GNNGC GG
Sbjct: 52 TGKLKDFSEQQLLDCSWGFGNNGCRGG 78
>SB_49461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 35.1 bits (77), Expect = 0.044
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 5/41 (12%)
Frame = +3
Query: 498 FRQSGYLVSLSEQNLIDCS----EQY-GNNGCNGGLMDXAF 605
F + G L++L+EQ L+DC+ E Y GNNGC GG AF
Sbjct: 33 FVKKGELLNLAEQQLLDCTWSTPEVYHGNNGCLGGWTWKAF 73
>SB_42540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1471
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +3
Query: 498 FRQSGYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDXAF 605
F + G L++L+EQ L+DC+ +GNNGC GG AF
Sbjct: 182 FVKKGELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAF 222
>SB_40986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 34.3 bits (75), Expect = 0.078
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +3
Query: 498 FRQSGYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDXAF 605
F + G L++L+EQ L+DC+ +GNNGC GG AF
Sbjct: 58 FVKKGELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAF 98
>SB_49174| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 209
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/83 (26%), Positives = 35/83 (42%)
Frame = +3
Query: 75 DLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 254
DLV + + F+ QH YE + E R I+ + I N++ + YKL N +
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNRR----SLPYKLEPNHFA 93
Query: 255 DMLHHEFVKTMNGFNKTAKHNKN 323
D+ EF + +K N
Sbjct: 94 DLTDDEFKSYKGALDDESKDVMN 116
>SB_33866| Best HMM Match : NOGCT (HMM E-Value=6.8)
Length = 234
Score = 33.1 bits (72), Expect = 0.18
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +3
Query: 75 DLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 254
DLV + + F+ QH YE + E R I+ + I ++ + YKL N +G
Sbjct: 38 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMKRR----SLPYKLEPNHFG 93
Query: 255 DMLHHEF 275
D+ EF
Sbjct: 94 DLTDDEF 100
>SB_49235| Best HMM Match : Peptidase_C1 (HMM E-Value=7.5e-07)
Length = 122
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 510 GYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDXAF 605
G L++L+EQ L+DC+ +GNNGC GG AF
Sbjct: 2 GELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAF 38
>SB_51097| Best HMM Match : Peptidase_C1 (HMM E-Value=9.3e-07)
Length = 122
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Frame = +3
Query: 510 GYLVSLSEQNLIDCSEQ-----YGNNGCNGGLMDXAF 605
G L++L+EQ L+DC+ +GNNGC GG AF
Sbjct: 2 GELLNLAEQQLLDCTWSTPGVYHGNNGCLGGWTWKAF 38
>SB_56676| Best HMM Match : Peptidase_C1 (HMM E-Value=0.0027)
Length = 295
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Frame = +3
Query: 255 DMLHHEFVKTMNGFNKTAKHNKNLYMKGGSVRGAKFISPANVKLPEQVDWRK-HGA--VT 425
D +H +K+ NG K++K + + R ++++ A KLP DWR +G +
Sbjct: 12 DKIHQ--MKSSNGGCYDRKYDKGIKPVIKTKRPHEYLNMA--KLPTSFDWRDVNGTNYAS 67
Query: 426 DIKDQG---KCGSCWSFSTTGAL 485
++Q CGSCW+ TT A+
Sbjct: 68 TTRNQHIPQYCGSCWAHGTTSAM 90
>SB_32046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 31.5 bits (68), Expect = 0.55
Identities = 22/83 (26%), Positives = 34/83 (40%)
Frame = +3
Query: 75 DLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKYG 254
DLV + + F+ QH YE + E R I+ + I N+ + YKL N +
Sbjct: 209 DLVDDDFDEFRQQHDKVYEDDSEHRRRKHIFRHNVRYIRSMNR----CSLPYKLEPNHFA 264
Query: 255 DMLHHEFVKTMNGFNKTAKHNKN 323
D+ EF + +K N
Sbjct: 265 DLTDDEFKSYKGALDDESKDVMN 287
>SB_9009| Best HMM Match : Peptidase_C1 (HMM E-Value=5.9e-40)
Length = 251
Score = 31.5 bits (68), Expect = 0.55
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 411 HGAVTDIKDQGKCGSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQ-----YGNNG 575
H TD + + T F + L++L+EQ L+DC+ +GNNG
Sbjct: 10 HNKNTDDNNNNNNNNIHHNKNTDDNNNNSFVKKCELLNLAEQQLLDCTWSTPGVYHGNNG 69
Query: 576 CNGGLMDXAF 605
C GG AF
Sbjct: 70 CLGGWTWKAF 79
>SB_34739| Best HMM Match : DUF360 (HMM E-Value=0.39)
Length = 1024
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCN 581
G WS STTGA GQH LV ++ + + G C+
Sbjct: 610 GKAWSASTTGARLGQHQPPGQGLVGINHRGKAWSASTTGGKACS 653
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 536
G WS STTGA GQH LVS++ +
Sbjct: 523 GKAWSASTTGARLGQHQPPGQGLVSINHR 551
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 536
G WS STTGA GQH LVS++ +
Sbjct: 552 GKAWSASTTGARLGQHQPLGQGLVSINHR 580
>SB_59668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 623
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 536
G WS STTGA GQH LVS++ +
Sbjct: 83 GKAWSASTTGARLGQHQPPGQGLVSINHR 111
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLSEQ 536
G WS STTGA GQH LVS++ +
Sbjct: 25 GKAWSASTTGARLGQHQPLGQGLVSINHR 53
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLS 530
G WS STTGA GQH LVS++
Sbjct: 112 GKAWSASTTGARLGQHQPPGQGLVSIN 138
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLS 530
G WS STTGA GQH LVS++
Sbjct: 141 GKAWSASTTGARLGQHQPPGQGLVSIN 167
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 450 GSCWSFSTTGALEGQHFRQSGYLVSLS 530
G WS STTGA GQH LVS++
Sbjct: 54 GKAWSASTTGARLGQHQPLGQGLVSIN 80
>SB_54948| Best HMM Match : PAN (HMM E-Value=0.0035)
Length = 396
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/60 (31%), Positives = 23/60 (38%)
Frame = -2
Query: 333 SCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPACKKRGPFRTSGCVWR*CACAQRISSC 154
SC++ CC+ Q C GG C+ C P KK T C R C SC
Sbjct: 129 SCSNGCCLGQRC--------LNGGTCVEHCEDPK-KKFSCACTPSCSGRTCESCGTYRSC 179
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = -2
Query: 348 GRSHPSCTDSCCVWQFCXXXXXXXRTRGGACLRTCSCPAC 229
GR CT C+ FC GG C C+ C
Sbjct: 254 GRCWQDCTGGKCLNMFCNSRMCIQSCGGGGCKMRCNALKC 293
>SB_17484| Best HMM Match : Pox_A32 (HMM E-Value=0.025)
Length = 1616
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 58 VLFSSLTWSRKRGVPSSCSTVSTTKARSRTISA*RY 165
VL L+W R +C TV T R RT+ A Y
Sbjct: 336 VLVEQLSWFRPTSFVETCLTVRTIATRLRTLCAYAY 371
>SB_6295| Best HMM Match : WSC (HMM E-Value=3.8e-10)
Length = 281
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +3
Query: 150 FRMKIYAEHKHIIAKHNQ---KYEMGLVSYKLGMNKY 251
+RM + A+ + ++AK+ KY MG+ Y++G+ KY
Sbjct: 148 YRMGV-AKCRMVVAKYRMGVAKYRMGVAKYRMGVAKY 183
>SB_55793| Best HMM Match : Spermine_synth (HMM E-Value=1.6e-15)
Length = 317
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 473 DGSFGRTALPSVRLPGVALGAKPHRLLGAVREQRLQR 583
DGS ++ +V P V LGA+ R L A R+++
Sbjct: 150 DGSVAVISVSAVNTPAVELGAEEQRSLAAFLSSRIEK 186
>SB_15032| Best HMM Match : OEP (HMM E-Value=0.24)
Length = 312
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +3
Query: 72 FDLVKEAWSAFKLQHRLNYESEVEDNFRMKIYAEHKHIIAKHNQKYEMGLVSYKLGMNKY 251
+ L K + K +++L N + K+ A+ KH +A N KY++ YKL KY
Sbjct: 198 YKLAKAKYKLAKAKYKLAKAKHKLANAKYKL-AKAKHKLA--NAKYKLAKAKYKLANAKY 254
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,724,546
Number of Sequences: 59808
Number of extensions: 376986
Number of successful extensions: 1393
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1475788250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -