Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P18
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.      27   0.47 
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    27   0.47 
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    27   0.47 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.1  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   3.3  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   4.4  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   5.8  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    23   7.7  

>Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.
          Length = 111

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 264 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 350
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 264 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 350
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 264 HHEFVKTMNGFNKTAKHNKNLYMKGGSVR 350
           +H+ +K +N   K  KH+ NL   GG  +
Sbjct: 75  YHKLIKPLNAIEKDRKHDFNLEKCGGQTQ 103


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 176 QAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 322
           Q   +Q +P  +   +  Q   +Q  R+ PP++R+  ++ Q   Q QQ+
Sbjct: 271 QQRQQQQRPRQQQQQQ-QQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQ 318



 Score = 25.8 bits (54), Expect = 1.1
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
 Frame = +2

Query: 104 QAAAPSQLRKRGRGQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVRED 283
           Q     Q +++ R Q   +  +  Q  H+Q Q + +      Q   +Q R+  P R +  
Sbjct: 335 QRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQ----QQQQQQPRQSLPHRKQTQ 390

Query: 284 YE---RLQQNCQTQQESVHEGWERPR 352
            +   RLQQ  Q QQ+S  +  ++P+
Sbjct: 391 LQLSPRLQQQQQQQQQSQQQQQQQPQ 416



 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 230 QAGHEQVRRHAPPRVREDYERLQQNCQTQQE 322
           Q   +Q  R+ PP++R+  ++ Q+  Q QQ+
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQ 285


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 272 VREDYERLQQNCQTQQESVHEGWERPRG 355
           ++EDY RL+   Q  +E     +++ RG
Sbjct: 174 LKEDYNRLKHEMQMAEEETQFTYQKKRG 201


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 218 PRFLQAGHEQVRRHAPPRVREDYER 292
           PR+LQ   ++++RH   R RE  +R
Sbjct: 700 PRYLQVSMDELKRHTQQR-REQLQR 723


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = +2

Query: 113 APSQLRKRGR-GQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYE 289
           A S   +RGR G    E  +  Q H ++ Q + +   +  Q   +Q ++    R  +  +
Sbjct: 205 AHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQ 264

Query: 290 RLQQNCQTQQE 322
           + QQ+ Q +Q+
Sbjct: 265 QQQQHQQREQQ 275



 Score = 23.8 bits (49), Expect = 4.4
 Identities = 17/73 (23%), Positives = 34/73 (46%)
 Frame = +2

Query: 122 QLRKRGRGQFPHEDIR*AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQ 301
           Q +++ + Q   +  R  Q   +Q Q + ++  R  Q   ++V++      R+  ++ QQ
Sbjct: 239 QQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQ-QQRVQQQNQQHQRQQQQQQQQ 297

Query: 302 NCQTQQESVHEGW 340
             Q QQ+   E W
Sbjct: 298 RQQQQQQEQQELW 310



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +2

Query: 173 AQAHHRQTQPEVRNGPRFLQAGHEQVRRHAPPRVREDYERLQQNCQTQQE 322
           AQ  H       R GP+  +   +Q +     + ++  ++ QQ  Q QQ+
Sbjct: 202 AQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQ 251


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 14/39 (35%), Positives = 16/39 (41%)
 Frame = +3

Query: 471 TTGALEGQHFRQSGYLVSLSEQNLIDCSEQYGNNGCNGG 587
           TT  L   H   +    SLS Q+       YGNN   GG
Sbjct: 349 TTAGLNSSHIYTTPSSNSLSTQHSHSPVNGYGNNHPTGG 387


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 219 GPFRTSGCVWR*CACAQRISSCGNCPR 139
           G    S CV R C   +  S C  CP+
Sbjct: 14  GSLEASRCVHRRCPKNEVYSCCAPCPQ 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,566
Number of Sequences: 2352
Number of extensions: 13191
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)