Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P17
         (545 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0753 + 21251216-21251221,21251486-21251557,21251920-212522...    28   5.6  
02_05_0769 + 31616644-31616875,31616980-31617203,31617308-316174...    28   5.6  
03_02_0507 - 8999902-9000649,9001106-9001225,9001314-9001394,900...    27   7.4  
06_01_0841 - 6379999-6380040,6380641-6380760,6380863-6380964,638...    27   9.8  

>07_03_0753 +
           21251216-21251221,21251486-21251557,21251920-21252253,
           21252596-21252733,21252811-21253202
          Length = 313

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 344 NWSTLCLSNQFIYK*LQCHEINKIKSINYN 255
           NWSTL   +  I   L  +++NK+  +NYN
Sbjct: 242 NWSTLASIHTMIRNKLTHNKLNKLVYVNYN 271


>02_05_0769 +
           31616644-31616875,31616980-31617203,31617308-31617426,
           31617528-31617684,31617928-31618029,31618111-31618230,
           31618761-31618855,31619900-31619984,31620090-31620180,
           31620534-31620618,31620702-31620806,31621019-31621894,
           31622016-31622124,31622266-31622414,31622518-31622737
          Length = 922

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -3

Query: 417 LISNKYNMESAHGNNI*TFLMKLNKL 340
           L++ K+ M +AHGN++ + +M L+KL
Sbjct: 249 LVAGKHVMIAAHGNSLRSIIMHLDKL 274


>03_02_0507 -
           8999902-9000649,9001106-9001225,9001314-9001394,
           9001591-9001613
          Length = 323

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -3

Query: 96  APSAPSGETTKRKRQNEAREALED 25
           +PS  SG+ T+RK+ N+  E+ ED
Sbjct: 70  SPSQHSGKETRRKQNNQLSESSED 93


>06_01_0841 -
           6379999-6380040,6380641-6380760,6380863-6380964,
           6381146-6381302,6381480-6381511
          Length = 150

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/26 (42%), Positives = 20/26 (76%)
 Frame = -3

Query: 417 LISNKYNMESAHGNNI*TFLMKLNKL 340
           L + K+ M +AHGN++ + +M+L+KL
Sbjct: 68  LTAGKHVMIAAHGNSLRSIIMQLDKL 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,794,523
Number of Sequences: 37544
Number of extensions: 196349
Number of successful extensions: 399
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)