Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P17
         (545 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    28   7.2  
AY069497-1|AAL39642.1|  602|Drosophila melanogaster LD22344p pro...    28   7.2  
AE014134-1751|AAF52846.3|  602|Drosophila melanogaster CG4747-PA...    28   7.2  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    28   7.2  

>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 95   PQAPRAERRRNGNDKTKHERRWKTQI 18
            P A R  RRR+  D T   +RW   I
Sbjct: 1090 PSAKRYHRRRSSEDSTSRHQRWPANI 1115


>AY069497-1|AAL39642.1|  602|Drosophila melanogaster LD22344p
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 123 EKHLXALRXAPSAPSGETTKRKRQNEAREALEDADCTSGRP 1
           +K   + + +PS PS    KR +++ + EAL+DAD  S  P
Sbjct: 219 QKRRTSAQQSPSGPSN--AKRGKRDVSGEALQDADEASSTP 257


>AE014134-1751|AAF52846.3|  602|Drosophila melanogaster CG4747-PA
           protein.
          Length = 602

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 123 EKHLXALRXAPSAPSGETTKRKRQNEAREALEDADCTSGRP 1
           +K   + + +PS PS    KR +++ + EAL+DAD  S  P
Sbjct: 219 QKRRTSAQQSPSGPSN--AKRGKRDVSGEALQDADEASSTP 257


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
            protein.
          Length = 1169

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 95   PQAPRAERRRNGNDKTKHERRWKTQI 18
            P A R  RRR+  D T   +RW   I
Sbjct: 1090 PSAKRYHRRRSSEDSTSRHQRWPANI 1115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,317,689
Number of Sequences: 53049
Number of extensions: 357628
Number of successful extensions: 649
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)