Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P14
         (566 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.45 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.2  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 404 TSSSCNAYDKGWLQGVGHGVV 466
           T  +C  YD+G+  G+G  VV
Sbjct: 448 TGKNCEIYDRGFPGGLGRAVV 468


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 270 YEFKEDDFTRVWKGIFYA-MWMSDKPLVQEDLAENIAGILDHFPPEH 407
           + F+  D T V   I Y  M +++   VQE++ + +  +LD  PP +
Sbjct: 295 FMFEGHDTTSV--SICYTLMLLANHREVQEEILKEMEAVLDEEPPTY 339


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = +3

Query: 270 YEFKEDDFTRVWKGIFYA-MWMSDKPLVQEDLAENIAGILDHFPPEH 407
           + F+  D T V   I Y  M +++   VQE++ + +  +LD  PP +
Sbjct: 295 FMFEGHDTTSV--SICYTLMLLANHREVQEEILKEMEAVLDEEPPTY 339


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 476 IDSKPLRGQHLEASLCHKHC 417
           IDSK   G  +E S+C   C
Sbjct: 511 IDSKLQTGGKVETSICKNFC 530


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,792
Number of Sequences: 336
Number of extensions: 2650
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)