Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_P14
(566 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U79775-1|AAC51625.1| 461|Homo sapiens NNP-1/Nop52 protein. 102 8e-22
BC014787-1|AAH14787.2| 466|Homo sapiens RRP1 protein protein. 102 8e-22
BC000380-1|AAH00380.1| 461|Homo sapiens ribosomal RNA processin... 102 8e-22
AP001752-4|BAA95542.1| 461|Homo sapiens NNP-1/Nop52 (NNP-1), no... 102 8e-22
AK223215-1|BAD96935.1| 461|Homo sapiens nucleolar protein NOP52... 102 8e-22
AK223185-1|BAD96905.1| 461|Homo sapiens nucleolar protein NOP52... 102 8e-22
BC028386-1|AAH28386.1| 758|Homo sapiens ribosomal RNA processin... 96 7e-20
BC014005-1|AAH14005.1| 408|Homo sapiens RRP1B protein protein. 96 7e-20
D80001-1|BAA11496.1| 762|Homo sapiens KIAA0179 protein. 52 1e-06
AL137757-1|CAB70909.1| 359|Homo sapiens hypothetical protein pr... 36 0.099
BC088360-1|AAH88360.1| 341|Homo sapiens GRHPR protein protein. 29 8.6
>U79775-1|AAC51625.1| 461|Homo sapiens NNP-1/Nop52 protein.
Length = 461
Score = 102 bits (245), Expect = 8e-22
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 168 EIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMWMSDKP 344
EI+ A+ L+GNE R+R ++ L+K++ R F D+ +VWKG+FY MWM DKP
Sbjct: 10 EIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 69
Query: 345 LVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLARRYLR 524
L+QE+L I+ ++ F H L +A ++ + EW GID+ R+DKF ML R L
Sbjct: 70 LLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 127
Query: 525 GSIRCLXRCEW 557
S++ L W
Sbjct: 128 ESLKVLKMQGW 138
>BC014787-1|AAH14787.2| 466|Homo sapiens RRP1 protein protein.
Length = 466
Score = 102 bits (245), Expect = 8e-22
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 168 EIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMWMSDKP 344
EI+ A+ L+GNE R+R ++ L+K++ R F D+ +VWKG+FY MWM DKP
Sbjct: 15 EIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 74
Query: 345 LVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLARRYLR 524
L+QE+L I+ ++ F H L +A ++ + EW GID+ R+DKF ML R L
Sbjct: 75 LLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 132
Query: 525 GSIRCLXRCEW 557
S++ L W
Sbjct: 133 ESLKVLKMQGW 143
>BC000380-1|AAH00380.1| 461|Homo sapiens ribosomal RNA processing 1
homolog (S. cerevisiae) protein.
Length = 461
Score = 102 bits (245), Expect = 8e-22
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 168 EIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMWMSDKP 344
EI+ A+ L+GNE R+R ++ L+K++ R F D+ +VWKG+FY MWM DKP
Sbjct: 10 EIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 69
Query: 345 LVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLARRYLR 524
L+QE+L I+ ++ F H L +A ++ + EW GID+ R+DKF ML R L
Sbjct: 70 LLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 127
Query: 525 GSIRCLXRCEW 557
S++ L W
Sbjct: 128 ESLKVLKMQGW 138
>AP001752-4|BAA95542.1| 461|Homo sapiens NNP-1/Nop52 (NNP-1), novel
nuclear protein 1 protein.
Length = 461
Score = 102 bits (245), Expect = 8e-22
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 168 EIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMWMSDKP 344
EI+ A+ L+GNE R+R ++ L+K++ R F D+ +VWKG+FY MWM DKP
Sbjct: 10 EIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 69
Query: 345 LVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLARRYLR 524
L+QE+L I+ ++ F H L +A ++ + EW GID+ R+DKF ML R L
Sbjct: 70 LLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 127
Query: 525 GSIRCLXRCEW 557
S++ L W
Sbjct: 128 ESLKVLKMQGW 138
>AK223215-1|BAD96935.1| 461|Homo sapiens nucleolar protein NOP52
variant protein.
Length = 461
Score = 102 bits (245), Expect = 8e-22
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 168 EIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMWMSDKP 344
EI+ A+ L+GNE R+R ++ L+K++ R F D+ +VWKG+FY MWM DKP
Sbjct: 10 EIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 69
Query: 345 LVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLARRYLR 524
L+QE+L I+ ++ F H L +A ++ + EW GID+ R+DKF ML R L
Sbjct: 70 LLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 127
Query: 525 GSIRCLXRCEW 557
S++ L W
Sbjct: 128 ESLKVLKMQGW 138
>AK223185-1|BAD96905.1| 461|Homo sapiens nucleolar protein NOP52
variant protein.
Length = 461
Score = 102 bits (245), Expect = 8e-22
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 1/131 (0%)
Frame = +3
Query: 168 EIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMWMSDKP 344
EI+ A+ L+GNE R+R ++ L+K++ R F D+ +VWKG+FY MWM DKP
Sbjct: 10 EIQLAQRLAGNEQVTRDRAVRKLRKYIVARTQRAAGGFTHDELLKVWKGLFYCMWMQDKP 69
Query: 345 LVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLARRYLR 524
L+QE+L I+ ++ F H L +A ++ + EW GID+ R+DKF ML R L
Sbjct: 70 LLQEELGRTISQLVHAFQTTEAQH--LFLQAFWQTMNREWTGIDRLRLDKFYMLMRMVLN 127
Query: 525 GSIRCLXRCEW 557
S++ L W
Sbjct: 128 ESLKVLKMQGW 138
>BC028386-1|AAH28386.1| 758|Homo sapiens ribosomal RNA processing 1
homolog B (S. cerevisiae) protein.
Length = 758
Score = 96.3 bits (229), Expect = 7e-20
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 153 AVVAQEIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMW 329
A+ EI+FA+ L+ +E +R+R +K L++++ R F +++ ++WKG+FY MW
Sbjct: 4 AMQPAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFYCMW 63
Query: 330 MSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLA 509
+ D+PL+QE+LA IA ++ H + T ++ + EW GID+ R+DK+ ML
Sbjct: 64 VQDEPLLQEELANTIAQLVHAVNNSAAQHLFIQT--FWQTMNREWKGIDRLRLDKYYMLI 121
Query: 510 RRYLRGSIRCLXRCEW 557
R LR S L R W
Sbjct: 122 RLVLRQSFEVLKRNGW 137
>BC014005-1|AAH14005.1| 408|Homo sapiens RRP1B protein protein.
Length = 408
Score = 96.3 bits (229), Expect = 7e-20
Identities = 48/136 (35%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 153 AVVAQEIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYE-FKEDDFTRVWKGIFYAMW 329
A+ EI+FA+ L+ +E +R+R +K L++++ R F +++ ++WKG+FY MW
Sbjct: 4 AMQPAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFYCMW 63
Query: 330 MSDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLA 509
+ D+PL+QE+LA IA ++ H + T ++ + EW GID+ R+DK+ ML
Sbjct: 64 VQDEPLLQEELANTIAQLVHAVNNSAAQHLFIQT--FWQTMNREWKGIDRLRLDKYYMLI 121
Query: 510 RRYLRGSIRCLXRCEW 557
R LR S L R W
Sbjct: 122 RLVLRQSFEVLKRNGW 137
>D80001-1|BAA11496.1| 762|Homo sapiens KIAA0179 protein.
Length = 762
Score = 52.0 bits (119), Expect = 1e-06
Identities = 41/135 (30%), Positives = 65/135 (48%)
Frame = +3
Query: 153 AVVAQEIKFARLLSGNENKVRERVIKTLKKWLQNCFHRGYEFKEDDFTRVWKGIFYAMWM 332
A+ EI+FA+ L+ +E +R+R +K L++++ R G F
Sbjct: 26 AMQPAEIQFAQRLASSEKGIRDRAVKKLRQYISVKTQRE------------TGGF----- 68
Query: 333 SDKPLVQEDLAENIAGILDHFPPEHLHHAMLMTKAGFKVLATEWFGIDQHRIDKFLMLAR 512
S + L+QE+LA IA ++ H + T ++ + EW GID+ R+DK+ ML R
Sbjct: 69 SQEELLQEELANTIAQLVHAVNNSAAQHLFIQTF--WQTMNREWKGIDRLRLDKYYMLIR 126
Query: 513 RYLRGSIRCLXRCEW 557
LR S L R W
Sbjct: 127 LVLRQSFEVLKRNGW 141
>AL137757-1|CAB70909.1| 359|Homo sapiens hypothetical protein
protein.
Length = 359
Score = 35.9 bits (79), Expect = 0.099
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +3
Query: 459 EWFGIDQHRIDKFLMLARRYLRGSIRCLXRCEW 557
EW GID+ R+DKF ML R L S++ L W
Sbjct: 4 EWTGIDRLRLDKFYMLMRMVLNESLKVLKMQGW 36
>BC088360-1|AAH88360.1| 341|Homo sapiens GRHPR protein protein.
Length = 341
Score = 29.5 bits (63), Expect = 8.6
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +3
Query: 261 HRGYEFKEDDFTRVWKGIFYAMWMSDKPLVQEDLAENIAGI--LDHFPPEHLHHAML-MT 431
H G +D TR +G W SD+P+ ++L +AG L +H+ +L
Sbjct: 29 HEGVRHPQD--TR--RGCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAA 84
Query: 432 KAGFKVLATEWFGIDQHRIDK 494
A KV++T GID +D+
Sbjct: 85 GANLKVISTMSVGIDHLALDE 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,740,901
Number of Sequences: 237096
Number of extensions: 1558088
Number of successful extensions: 2790
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2776
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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