Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_P13
(525 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 201 9e-51
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 152 4e-36
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 124 6e-32
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 134 2e-30
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 127 2e-28
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 122 4e-27
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 122 4e-27
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 115 8e-25
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 113 2e-24
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 113 3e-24
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 107 2e-22
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 103 2e-21
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 101 1e-20
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 79 5e-14
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 71 2e-11
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 64 2e-09
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 62 1e-08
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 60 4e-08
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 55 1e-06
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 54 2e-06
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 53 5e-06
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 53 5e-06
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 52 6e-06
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 52 8e-06
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 49 8e-05
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 48 1e-04
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 45 0.001
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 44 0.002
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 43 0.004
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 42 0.011
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 41 0.015
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 40 0.035
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 40 0.046
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 39 0.061
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.11
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 37 0.25
UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2; ... 34 2.3
UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2; ... 33 4.0
UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep... 33 4.0
UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep: De... 33 4.0
UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella ... 32 7.0
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 201 bits (490), Expect = 9e-51
Identities = 93/117 (79%), Positives = 102/117 (87%)
Frame = +2
Query: 83 TAXLRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 262
T +RTRKFM N LL RKQ V VLHPGK TV KTEIREKLAKMYK TPDV+FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 433
FGGGK+TGF +IYD+LD AKK EPKHRLARHGLYEKK+ +RKQRKERKNRMKKVRGT
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGT 120
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 152 bits (369), Expect = 4e-36
Identities = 73/121 (60%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Frame = +2
Query: 71 MRXGTAXLRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 247
M +RTR FM N LLARKQ V VLHPG+ VSK E++EKLA+MY+V P+ +F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 248 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 427
F+T+FGGGKS+G+ LIYDT++ AKKFEPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 428 G 430
G
Sbjct: 121 G 121
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 124 bits (298), Expect(2) = 6e-32
Identities = 58/88 (65%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFG 268
LRTRKFM N LL+RKQ V VLHPG+ VSK +++EKLAK+Y+V + +FVF F+T+FG
Sbjct: 12 LRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHFG 71
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLAR 352
GGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 72 GGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
Score = 35.9 bits (79), Expect(2) = 6e-32
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +2
Query: 353 HGLYEKKRPTRKQRKERKNRMKKVRG 430
+GL K +RKQ KERKNR KK+RG
Sbjct: 128 NGLATKVEKSRKQMKERKNRAKKIRG 153
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 134 bits (323), Expect = 2e-30
Identities = 61/107 (57%), Positives = 81/107 (75%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGG 271
+RTRKFM N LL R+Q V +LHPG+ +S +IRE+LAK YK +PD+VF FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 272 GKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 412
GKSTGFAL+YD+LD AKKFEP++RL R + P R++ +ER +
Sbjct: 67 GKSTGFALVYDSLDHAKKFEPRYRLIRVKWVAGRHPQRQKVEERTQK 113
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 127 bits (306), Expect = 2e-28
Identities = 61/116 (52%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFG 268
+R +K+M N LL RKQ +LHP K +V+K E++E+LAKMYK+ + + +FGFKT FG
Sbjct: 7 IRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLFG 66
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKK-RPTRKQRKERKNRMKKVRGT 433
GG++ GF LIY +D KKFE K+RL R GL +K+ + R+ KE KNR KKVRGT
Sbjct: 67 GGRTKGFGLIYKNVDAVKKFEKKYRLVREGLIDKETKAGRRASKELKNRRKKVRGT 122
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 122 bits (295), Expect = 4e-27
Identities = 62/122 (50%), Positives = 83/122 (68%), Gaps = 9/122 (7%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKT--------EIREKLAKMYKVTPD-VVFV 244
L+ R+F+ + + +C VLHPG+ VSK E++EK+AKMY V+ + V +
Sbjct: 6 LQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDEKCVSI 65
Query: 245 FGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKV 424
FGF+T FGGGKSTGF LIYD +D KKFEPKHRL R GL + + +RK KE+KNR+KK+
Sbjct: 66 FGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGLKDAVQKSRKNIKEKKNRVKKL 125
Query: 425 RG 430
RG
Sbjct: 126 RG 127
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 122 bits (295), Expect = 4e-27
Identities = 62/116 (53%), Positives = 82/116 (70%), Gaps = 2/116 (1%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFG 268
+R R+F+ N LLARKQ V V+HP VSK++++ KLAK+YKV + + +FGFKT FG
Sbjct: 34 VRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAFG 93
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPT-RKQRKERKNRMKKVRGT 433
GG+S+GF +IY+ + KKFE ++R R G+ EK T RK RKE KNR KKVRGT
Sbjct: 94 GGRSSGFCVIYNNISALKKFEHRYRQVRMGIAEKVTATGRKGRKETKNRRKKVRGT 149
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 115 bits (276), Expect = 8e-25
Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTP-DVVFVFGFKTNFG 268
+RTR + N LL RKQ V + HPG TEI+EKLAKMYKV + + GF T +G
Sbjct: 10 IRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKYG 69
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMK 418
GGK++GFALIYDTL KKF PKH+L R GL +K + RK RKE K + +
Sbjct: 70 GGKTSGFALIYDTLSALKKFVPKHQLIRAGLDKKTKAPRKARKEHKKKWR 119
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 113 bits (272), Expect = 2e-24
Identities = 55/116 (47%), Positives = 74/116 (63%)
Frame = +2
Query: 83 TAXLRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTN 262
T +RT+K + N LL+R+Q VLHP PT SK +IRE+LAK KV V V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 430
+GGGKSTGFAL+YD K+EP +RL + + +K TR+ KE K ++K+ G
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRKVKILGEKPNTRRSFKELKRKIKRTSG 117
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 113 bits (271), Expect = 3e-24
Identities = 63/125 (50%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Frame = +2
Query: 65 FKMRXGTAXLRTRKFMXNXLLARKQXVCXVLHPGK-PTVSKTEIREKLAKMYKVTPDV-- 235
F+ + +RT +F N LL RKQ + V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 236 VFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRM 415
V +FGFKT FGGGK+TGF LIYD L K+FEP +R R G + + P RK KER+NR
Sbjct: 62 VSLFGFKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMGFGKARLPARKSVKERRNRN 121
Query: 416 KKVRG 430
KK+RG
Sbjct: 122 KKLRG 126
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 107 bits (257), Expect = 2e-22
Identities = 50/111 (45%), Positives = 71/111 (63%)
Frame = +2
Query: 101 RKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 280
RK++ N LL RKQ V + H G ++ EI++++A K D+V +FG +T FGGG +
Sbjct: 9 RKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFGGGHT 68
Query: 281 TGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 433
TGF +YD+LD KK EPKHRL + GL EK + TR+ RK + + KV G+
Sbjct: 69 TGFGFVYDSLDALKKTEPKHRLIKAGLAEKGKVTRRMRKNARRQKVKVWGS 119
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 103 bits (248), Expect = 2e-21
Identities = 53/117 (45%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Frame = +2
Query: 83 TAXLRTRK-FMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 259
T ++TRK + L R+Q +LHP KPT S+ + ++LA YK V V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 260 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 430
FGG ++TGFALIYDT KFEPK RL R G+ K+ +RK KE K+++KK RG
Sbjct: 94 TFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGIIPKRDGSRKGWKEVKSKLKKTRG 150
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 101 bits (241), Expect = 1e-20
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 92 LRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVFGFKTNFG 268
L+T+KF N LL RKQ + + K +SK +R +L+K Y++ P ++F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRG 430
G K + F IY L+ A+ EPKHRL ++ L + + + KQRKE+KN+MKK G
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNLMKLELQSSKQRKEKKNKMKKYFG 123
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 79.4 bits (187), Expect = 5e-14
Identities = 48/128 (37%), Positives = 72/128 (56%)
Frame = -3
Query: 466 LLGGRTYFRFLGTADLLHSVLTFFTLFARGPLLLVQAVAG*PVLGLELLGQIECVVDQSE 287
LL T+ F T LHSVL FFTL + LL++ + G V L L ++ VVD ++
Sbjct: 5 LLFTSTHICFGCTPYFLHSVLAFFTLLSGSLFLLIKPMLGKSVFRLILFCIVKRVVDHAK 64
Query: 286 SS*FATSEVCLETEYEHYIGSNLVHFGELLTDLGLADSWFSWM*NXANXLLARQQXVGHE 107
+ FATS+V +T++++ I LVH +L +D L DS F+WM + LLA Q+ V H+
Sbjct: 65 ACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSLGDSSFAWMKYINDHLLALQKSVCHK 124
Query: 106 FASAKXRC 83
+ + C
Sbjct: 125 LSCSDSHC 132
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/106 (34%), Positives = 58/106 (54%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL+RK+ HPG P SK EIREK++++Y+ D V V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 296 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVRGT 433
IY ++++ E KH +A+ E R+ RK+ + + K+ GT
Sbjct: 68 IYSSIEVLSNIEKKHIVAKLTGKEFHVTPRRVRKDERKKRYKIFGT 113
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/86 (34%), Positives = 47/86 (54%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N L+ RK+ + HPG+PT S+ +++ KL M + P+ + ++ FG KS G+A
Sbjct: 11 NKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGSYKSKGYAK 70
Query: 296 IYDTLDLAKKFEPKHRLARHGLYEKK 373
Y D EP++ L R G+ EKK
Sbjct: 71 YYYDKDRMLYIEPEYILIRDGIIEKK 96
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LLAR++ + +H T ++ +RE +AK + VFV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 296 IYDTLDLAKKFEPKHRLARH------GLYEKKRPTRKQRKERKNRMKK 421
+Y+ +A+ EP + LAR+ L E+ + R +R+E+K R KK
Sbjct: 74 VYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 59.7 bits (138), Expect = 4e-08
Identities = 36/115 (31%), Positives = 60/115 (52%)
Frame = +2
Query: 59 KSFKMRXGTAXLRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVV 238
K+ K+ T + K+ N L+ R++ V + H GK T S+ IR + AK+Y V + V
Sbjct: 3 KTVKIGEFTGEIVVDKY--NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKV 60
Query: 239 FVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKER 403
+V T +G G S IYD+++ AK+FEP + + R+ + + KE+
Sbjct: 61 YVREINTEYGLGVSNATIHIYDSVERAKQFEPPYVIKRNEYASQSYQLEQMMKEQ 115
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 54.8 bits (126), Expect = 1e-06
Identities = 30/102 (29%), Positives = 50/102 (49%)
Frame = +2
Query: 86 AXLRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNF 265
+ LR + N L+ R++ + + H G T S+ ++ E L M + V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 266 GGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQ 391
G G S IYD+ K FEPKH L R+GL +++ +++
Sbjct: 64 GQGVSEALIHIYDSDVKMKMFEPKHILRRNGLIQEQEAKKQE 105
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 54.0 bits (124), Expect = 2e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL RK+ V H T K+E+ KLA + V +VV + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 296 IYDTLDLAKKFEPKHRLARH 355
IY +++ + EP+H + RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 52.8 bits (121), Expect = 5e-06
Identities = 25/79 (31%), Positives = 39/79 (49%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N ++ RK+ V H G PT S+ +IR+ ++ D+V + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 296 IYDTLDLAKKFEPKHRLAR 352
+Y D+ KFEP H + R
Sbjct: 83 VYSEKDVLSKFEPAHLVNR 101
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 52.8 bits (121), Expect = 5e-06
Identities = 29/85 (34%), Positives = 48/85 (56%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL R++ C + GK T S+ E+R K+A + P+ V V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 296 IYDTLDLAKKFEPKHRLARHGLYEK 370
IYDT++ +K E +H + R+ + E+
Sbjct: 73 IYDTVEDLQKIEEEHIIERNKVEEQ 97
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 52.4 bits (120), Expect = 6e-06
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N L+ R++ V + H KPT + +R+KLA++ V +++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 296 IYDTLDLAKKFEPKHRLARHG 358
+YD+ + A FEPK+ + R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 52.0 bits (119), Expect = 8e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = +2
Query: 80 GTAXLRTRKFMXNXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKT 259
G ++ + N LL RK+ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 260 NFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 421
+G G S +Y + A+ EP + R+ ++ + R + K R+ KK
Sbjct: 96 QYGVGVSRIEVHVYFDKNTAELVEPLYVRLRNMPKDQAKKIRDELKSRRKSEKK 149
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 48.8 bits (111), Expect = 8e-05
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N L R + + V HP + T ++ E +EK+A+M V + + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 296 IYDTLDLAKKFEPKHRLARHGL 361
+YD +D AK+ E K L R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 48.0 bits (109), Expect = 1e-04
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL RK+ L+ G+ T E++ KL M D++ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 296 IYDTLDLAKKFEPKHRLARH 355
IY++ + + EP+H + ++
Sbjct: 71 IYESAEKLTEIEPEHVIKKN 90
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL R++ V + G T S+ ++R KLA M +++ + KT +G +S G+A
Sbjct: 11 NPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGMQESKGYAK 69
Query: 296 IYDTLDLAKKFEPKHRLARHGL 361
+Y+ D K+ E ++ L R+ +
Sbjct: 70 LYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/95 (25%), Positives = 48/95 (50%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N ++ R++ V H G T+S+ ++ + +A Y D+V + T +G G S A
Sbjct: 25 NNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIKKIHTLYGAGISYVRAN 84
Query: 296 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKE 400
IY+ ++FEP++ + R + K+ + +K+
Sbjct: 85 IYNDKKTLQEFEPQYLIGRDTGQKVKKGGKGAQKQ 119
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 43.2 bits (97), Expect = 0.004
Identities = 27/86 (31%), Positives = 42/86 (48%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL RK+ + T S+ +IR+ LA Y ++ V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 296 IYDTLDLAKKFEPKHRLARHGLYEKK 373
IYDT + A +EP + L R+ L K+
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKLKVKE 99
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 41.5 bits (93), Expect = 0.011
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N +L R V+H + T S+ +R+ LA + V + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 296 IYDTLDLAKKFEPKHRLARH 355
+YD + A+ E H L R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 41.1 bits (92), Expect = 0.015
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL RK+ V H G PT + +++ KLA + D++ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 296 IYDTLDLAKKFEPKHRLARHGLYEK 370
+YD ++ K E +H L ++ + E+
Sbjct: 70 LYDNEEMLKLVEREHILRKNKIEEE 94
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 39.9 bits (89), Expect = 0.035
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 284 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 412
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 39.5 bits (88), Expect = 0.046
Identities = 26/79 (32%), Positives = 39/79 (49%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL+R++ + + G T S+ +I KL + +V + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 296 IYDTLDLAKKFEPKHRLAR 352
IYD+ D KK E + AR
Sbjct: 70 IYDSEDAKKKTEHPYLSAR 88
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 39.1 bits (87), Expect = 0.061
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 143 VCXVLHPGKPTVSKTEIREKLAKMYKVTPDVV 238
V V+ PG+PT K +IREK+A Y + PD +
Sbjct: 2 VAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 38.3 bits (85), Expect = 0.11
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL RK+ + G T S+ + KLA M D + + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 296 IYDTLDLAKKFEPKH 340
+Y + + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 37.1 bits (82), Expect = 0.25
Identities = 24/79 (30%), Positives = 38/79 (48%)
Frame = +2
Query: 116 NXLLARKQXVCXVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFAL 295
N LL+R + + G T ++++I K+A M + + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 296 IYDTLDLAKKFEPKHRLAR 352
IYDT + K E + +AR
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_A2FEP6 Cluster: Putative uncharacterized protein; n=2;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 326
Score = 33.9 bits (74), Expect = 2.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 289 RFDLRHTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGPRYQE 438
+ +RH R+ + + + PP+PV+E E + A EQ EE P +E
Sbjct: 110 KITVRHPRNTEPFKELNPLLPPKPVKEGEEEEEKAEEEEEQKEEEPENEE 159
>UniRef50_Q08FF6 Cluster: Putative uncharacterized protein; n=2;
Mule deer poxvirus|Rep: Putative uncharacterized protein
- Deerpox virus W-1170-84
Length = 129
Score = 33.1 bits (72), Expect = 4.0
Identities = 23/81 (28%), Positives = 37/81 (45%)
Frame = +2
Query: 167 KPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRL 346
KPT+ + ++ EKL K YK + F+ F T F +I D K+F K+
Sbjct: 37 KPTMDRIDLAEKLIKKYKDIRSLYFLLNI---FREMPDTEF-VIKQLSDYIKRFNRKYLE 92
Query: 347 ARHGLYEKKRPTRKQRKERKN 409
+ K +PT K++ +N
Sbjct: 93 QNDTTFGKTQPTIKRKHRFRN 113
>UniRef50_Q9VT48 Cluster: CG8177-PA, isoform A; n=13; Diptera|Rep:
CG8177-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 1268
Score = 33.1 bits (72), Expect = 4.0
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +2
Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 421
FGG K +L YD + E K R +RH Y +++ + + E KN++++
Sbjct: 133 FGGKKKIPPSLSYDEQPTDQSHERKRRRSRHQYYRQRKFSHQDSVEPKNKLEE 185
>UniRef50_Q5CJF6 Cluster: Delta-COP; n=2; Cryptosporidium|Rep:
Delta-COP - Cryptosporidium hominis
Length = 535
Score = 33.1 bits (72), Expect = 4.0
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 230 DVVFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKN 409
DV+F F +FG +S + I L++ + E H+L R K+ +++R+ N
Sbjct: 113 DVIFAFDEIVSFGYRESINLSQIKTCLEMESQEEKLHKLIRQ---NKENEEKERRRHIAN 169
Query: 410 RMKKVRGT 433
R+ K R T
Sbjct: 170 RLDKERVT 177
>UniRef50_Q5KM71 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 548
Score = 32.3 bits (70), Expect = 7.0
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = -2
Query: 431 YRGPSSFCSYVLYAVC--AWASSSRTGRGGLTCAWARTSWP 315
Y S C L+A C WA +++ +TC W R WP
Sbjct: 452 YDDSLSGCGRPLHAECFRMWAVTAKKSGKDVTCVWCRNEWP 492
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,014,875
Number of Sequences: 1657284
Number of extensions: 8983574
Number of successful extensions: 28376
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 26989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28238
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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