Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_P12
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.0  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   9.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   9.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   9.3  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   9.3  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   9.3  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   9.3  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   9.3  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 319 ENESELRAGFHAIPSMQRMHMHVISTDMISTSL 417
           EN  ++    H I SM   H H +  DM+  ++
Sbjct: 344 ENMMDMSLTRHQISSMGHSHAHPMHHDMLPETM 376


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 319 ENESELRAGFHAIPSMQRMHMHVISTDMISTSL 417
           EN  ++    H I SM   H H +  DM+  ++
Sbjct: 344 ENMMDMSLTRHQISSMGHSHAHPMHHDMLPETM 376


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 458 LFPTMVSLQFMLTISHIF 511
           L  T  SLQ M+ + HIF
Sbjct: 205 LLITFTSLQIMVYLQHIF 222


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 458 LFPTMVSLQFMLTISHIF 511
           L  T  SLQ M+ + HIF
Sbjct: 205 LLITFTSLQIMVYLQHIF 222


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 458 LFPTMVSLQFMLTISHIF 511
           L  T  SLQ M+ + HIF
Sbjct: 525 LLITFTSLQIMVYLQHIF 542


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 525 YTSQKNM*DIVSMNCKLTIVGNKKLCTET 439
           YT  +++ D VS   +   +G KKL  +T
Sbjct: 356 YTVDRDLQDEVSQKIRKYYLGEKKLSKKT 384


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 525 YTSQKNM*DIVSMNCKLTIVGNKKLCTET 439
           YT  +++ D VS   +   +G KKL  +T
Sbjct: 356 YTVDRDLQDEVSQKIRKYYLGEKKLSKKT 384


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 525 YTSQKNM*DIVSMNCKLTIVGNKKLCTET 439
           YT  +++ D VS   +   +G KKL  +T
Sbjct: 356 YTVDRDLQDEVSQKIRKYYLGEKKLSKKT 384


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -2

Query: 525 YTSQKNM*DIVSMNCKLTIVGNKKLCTET 439
           YT  +++ D VS   +   +G KKL  +T
Sbjct: 356 YTVDRDLQDEVSQKIRKYYLGEKKLSKKT 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,265
Number of Sequences: 336
Number of extensions: 3629
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)